Lupinus angustifolius (narrow-leaved blue lupine): 109343302
Help
Entry
109343302 CDS
T04664
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03022
Basal transcription factors
lang03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109343302
09124 Replication and repair
03420 Nucleotide excision repair
109343302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109343302
03400 DNA repair and recombination proteins [BR:
lang03400
]
109343302
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109343302
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109343302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
109343302
NCBI-ProteinID:
XP_019437076
UniProt:
A0A4P1RP62
LinkDB
All DBs
Position
LG03:7119986..7124955
Genome browser
AA seq
421 aa
AA seq
DB search
MSKLPERPLNGDVEDDDEDEANDGLEAWERTYAEDRSWEDLQEDESGLLRPIDDTAIYHA
QYRRRLRALASTAATARIQKGLIRYLYVVVDLSKAASERDFRPSRMAVIGRQVETFIREF
FDQNPLSHVGLVTIKDGIAHCLTELGGSPESHIKALMGKLECSGDASLQNALELVLGYLN
QIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGG
TYYVALDETHFKELILEHAPPPPAISEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGG
GYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSQNDPRNSLS
DTCFGCQQSLLTQGSKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFQHSKSVIAA
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacttccggaaagaccattgaatggagatgtagaagatgacgatgaagatgaa
gctaatgatggccttgaagcctgggagagaacttatgcagaagatagatcgtgggaggat
ttgcaagaggatgaatctggacttcttcgccccatagatgatacagccatttatcatgcc
cagtatcgcaggcgccttcgtgcccttgcttccacagctgctacagcacgaattcagaag
ggtctgattcgatacctatacgttgttgttgacctatccaaggcagcttcagagagggac
tttcgaccaagtaggatggctgttatcgggaggcaggttgagacatttatcagggagttc
tttgatcagaatccacttagtcatgttggccttgtgactataaaagatggaattgctcat
tgcttaacagaacttggcggcagtcctgagtcccacattaaagctttgatgggtaaactg
gaatgctccggtgatgcctccctacaaaatgcactagagcttgttcttggttatctaaat
caaattccatcatatggccatcgagaagttctgatcttatattcagctctcagtacatgt
gatcctggtgatctcatggaaaccatccagaaatgcaaaaagagtaaaataaggtgctct
gtcattggtcttgctgctgaaatgtttatttgcaaacatctctgccaagaaactggagga
acttattatgtggcactagatgagacccactttaaagagttaattcttgagcatgcaccg
ccacctccagcaatatctgagtatgctactgctaatttaattaagatgggctttccacaa
agagcagctgagggttctgtcgcaatttgtacatgccacgaagaggctaaaacaggaggg
gggtacacttgtccaagatgcaaagttcgtgtctgtgagcttcctactgaatgtcgcatc
tgtggattgacccttatttcttcaccccatttagcaaggtcatatcatcatctttttcct
atagtgccgtttgacgaggtctctccatcatctcaaaatgatccacgtaacagtttatcg
gacacttgttttggttgtcaacaaagtcttcttacccagggaagtaagcctggactttct
gttacttgcccaaaatgcaaacaacaattctgcctcgactgcgacatttacattcatgag
agcttacacaactgcccaggttgtgagagtttccaacattctaagtcagtaattgctgca
caatga
DBGET
integrated database retrieval system
