Lupinus angustifolius (narrow-leaved blue lupine): 109343662
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Entry
109343662 CDS
T04664
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109343662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109343662
03012 Translation factors [BR:
lang03012
]
109343662
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109343662
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109343662
Translation factors [BR:
lang03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109343662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
NACHT
T2SSE
ATPase
Dicer_dimer
AAA_11
ABC_tran
PhoH
DUF429
Motif
Other DBs
NCBI-GeneID:
109343662
NCBI-ProteinID:
XP_019437618
LinkDB
All DBs
Position
LG03:complement(21927818..21940163)
Genome browser
AA seq
1107 aa
AA seq
DB search
MKELPLPSQPSSYDAVYVSEQVPITEKGLDGKFDTSSLPGASPNDDTSEWKQKLTMLLND
KNKQELISREKKDRRNFQQLAALASRMGLYSHLYAKVVVFSKVPLPNYRYDLDDRRPLRE
VNLPITTLRRVDAYLEEYQSQKSRMKESFPDLSFSRLNSGIDTDELLFEQPKPLASNKAV
LEKILRQRSLQMRDQQQAWQESIEGRRMLEFRSSLPAYKEKEAILSAISKNQVIIISGET
GCGKTTQLPQFILESEVELVRGAFCNIICTQPRRISAISVSERVACERGEKLGESVGYKV
RLEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHIIVDEIHERGMNEDFLFIVLKDLLP
HRPELKLVLMSATLDAELFSSYFSGAAVIKIPGFTYPVQTHFLENILEMSGYSLTHDNQI
DDYGQERIWKMNKQVPRKRKSQIASAAEDAVRAADFKDYCLQTQESLSCWNPDCIGFNLI
EYILCNICEHERPGAVLIFMIGWDDINALKEKLLMHSILGDPSRVLLLTCHGSMASSEQS
LIFEETEDGVRKIVLATNIAETSITISDVVFVLDCGKAKESSYDALNNTPCLLPTWISKV
SAQQRRGRAGRVQPGECYHLYPRCVHDAFTEYQLPEILRTPLQSLCLQIKSLKLGSISEF
LSRALQSPEMLAVQNAIEYLKIIGAFDENENLTILGHYLTMLPMEPKLGKMLIFGAIFNC
LDPILTIAAGLSVRDPFLAPLDKKDLAEAAKSQFSHDYSDHLAIVRAYEGWKDAEIGLTG
HEYCWKNFLSAQSMKTIDALREEFLSLLKDIGLVDSNATSCNAWSYDVHLIRAAICYGLY
PGICSIVHNEKSFSLKTMEDGQVLLHSNSVNARETIIPHPWLVFNEKIKVNSIFLRDSTA
VSDSLVLLFGGSISKGDADGHLKMLGGYLEFFMEPTVADMYQSIRQKLADCIQSKLLFPM
MGIHSFHELLSAVRLLISDDKCEGRFVFGCQILKPSQPSMMTLQPVLVSRTESGPGGDNS
KGQLQTVLTRAGLAAPVYKTMQLNNQFRSTVEFNGVQITGQPCNNKKTAEKDAAAEALVY
LMNKRHTGHEYINHMAMLLKKSKKDHI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaattacctcttccttctcaaccatcctcatacgacgccgtttacgtttccgag
caagttcctatcactgagaaaggtttggatggtaaatttgacacttcctcattaccgggt
gcttcccccaatgatgatacttctgagtggaagcagaaattaaccatgcttttaaacgac
aagaataagcaagagttgatatcaagggagaaaaaggataggcgtaattttcagcaattg
gctgctttggcaagcagaatgggtttgtatagccatctgtatgcaaaggttgttgtattc
agcaaggttccacttccaaactatagatatgatttggacgatcgacgcccactgagggag
gtgaacctgcctattactacattaaggcgagttgatgcatatcttgaagaataccaaagc
cagaagtccaggatgaaggaaagctttccagatttgtccttttcaagattaaacagtggc
attgatacagatgaactactttttgagcagcctaagccactagcatcaaataaggctgtt
ttggagaaaattctcaggcagagaagcttacaaatgcgcgatcagcaacaagcctggcag
gaatctatagaaggaagaagaatgttggaatttcgtagtagtctccctgcttataaagag
aaggaagcaatattgtcagccatatcaaagaaccaggtaattatcatttcaggcgaaaca
ggttgtgggaagacaacacaacttccacaatttattttagaatctgaggtagaattagtc
cgtggagctttttgtaatattatatgcacacaaccaagacgcatttcagcaatttctgtt
tctgaaagggttgcttgtgagagaggggagaagttgggcgaatctgttggttataaagtt
agactggagggtatgaaagggagagatacccatcttctcttttgcacaacaggcatttta
ttgagaagattactagctgatagaaacttaaaaggtgtaactcacattattgtggatgaa
attcatgagcgtgggatgaatgaagattttctgtttattgttcttaaagatctcctaccc
caccgaccagaattgaaactagttttgatgagtgccacccttgatgcagagctcttctcc
tcatacttcagtggagctgcagttattaagattccgggttttacataccctgttcaaact
cattttttggagaatattctggaaatgtcgggctacagtttgactcatgataatcaaatt
gatgattacggccaagaaaggatttggaaaatgaacaaacaggtcccaagaaagagaaaa
agccaaattgcttctgctgcagaggatgctgtaagagctgctgatttcaaagattactgt
ctgcaaacacaggagtctttgtcatgttggaatcctgactgtattggttttaacctcata
gaatatatcttgtgcaatatatgtgagcatgaaaggcctggtgctgtattaattttcatg
ataggatgggatgatataaatgctctgaaagagaagctcctgatgcattctatattgggt
gatccaagccgagttttgttgcttacatgccatggctcaatggccagttcggagcagagt
ttaatatttgaagaaactgaagacggagtacggaaaatagtgctagctaccaatattgct
gaaacgagtatcactataagtgatgttgtttttgttcttgactgtggaaaggcaaaagaa
tcatcatatgatgcactgaataacacaccttgtttgcttcccacctggatctcaaaggtt
tctgctcaacaaagaagaggaagagctggtcgtgttcaacctggtgaatgttaccatctc
tatcctagatgtgttcatgatgctttcacagagtatcagttgcctgaaattttgaggaca
cctttgcaatctctctgtctgcaaataaaaagtttaaagcttggaagtatatccgagttc
ttgtctagggctttacagtctcctgaaatgctcgcagttcaaaatgcaattgaatattta
aaaataattggagcttttgacgagaatgagaatctgactattctaggacattatctgaca
atgcttccaatggaacccaaacttggaaagatgcttatatttggtgccatcttcaattgc
ctggatcccatattaactattgctgcgggcctcagtgtgagagatccttttctagctcca
ttggataaaaaagatcttgcagaggctgcaaaatctcagttctcccatgattacagtgac
cacctcgcaattgtgagggcttatgagggatggaaagatgctgaaataggcctcactgga
catgaatactgctggaaaaactttctttctgcacaatccatgaaaactattgatgctctt
cgtgaagaattcttatccctgcttaaggatattggattagttgatagcaatgcaaccagt
tgcaatgcatggagctatgatgttcatcttattcgtgcagctatttgctatggcttatat
cctggaatttgctctattgtgcataatgagaagtcattttctctgaaaacaatggaggat
ggtcaagtcctcctacattcgaattcagttaatgctcgggaaactataattccacaccca
tggctagtttttaatgagaagataaaggtgaactcaatatttctccgtgactcaacagct
gtgtctgattcattggtgcttctattcggtggaagcatctcaaaaggagatgctgatggt
cacttaaaaatgttagggggatatcttgagtttttcatggaacccactgttgctgacatg
taccagagtataaggcaaaaacttgctgactgcattcagagcaaactactgtttccgatg
atgggcatacattcatttcatgagctcctatctgctgtacggttgctgatttcagacgat
aaatgtgaaggcagatttgtatttggttgccagatccttaaaccatcacagccatctatg
atgaccttgcagccagtgttggtttcaaggacagagagtggacccgggggtgataattct
aaaggtcagctccaaactgtgttgacaagggccggattggctgcgcccgtctacaagact
atgcaattgaacaatcagtttcgttctacagtcgagtttaacggagtgcaaataacaggc
caaccttgtaacaataagaaaacagcagaaaaagatgccgcggctgaggcactagtgtat
cttatgaataaaagacatactgggcatgagtatatcaatcacatggcaatgttgctaaag
aaaagtaagaaggatcacatttaa
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integrated database retrieval system
