Lupinus angustifolius (narrow-leaved blue lupine): 109343779
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Entry
109343779 CDS
T04664
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109343779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109343779
03036 Chromosome and associated proteins [BR:
lang03036
]
109343779
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109343779
Coactivators
SAGA/TFTC/STAGA complex
109343779
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109343779
STAGA complex
109343779
TFTC complex
109343779
SAGA complex
109343779
SLIK complex
109343779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
Ge1_WD40
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
PEP5_VPS11_N
WD40_like
Nbas_N
Cytochrom_D1
LisH
WD_LRWD1
Beta-prop_VPS8
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
109343779
NCBI-ProteinID:
XP_019437797
UniProt:
A0A4P1RPA7
LinkDB
All DBs
Position
LG03:complement(23451923..23459456)
Genome browser
AA seq
666 aa
AA seq
DB search
MDEDQIVGYVTAYLKKKGFKQTEKVFQEEFQLNKTISPSDSDIGNQILSFAHLESGPARF
HDGYSRLRTWTYSSLDLYKYELLRVLYPVFIHCFMDLVAKAHIQEARNFFNTFREDHEMM
HLRDLQKLEGVLSPTHLEEMEFAHSLRQSKFNIKICEYSYELLLQHLHSTQSTTILGIIN
EHINFQVTPGQPSSISDDPEAVTLTGSSQDAINQINQKEVHWGLLEDSLEERLEKAGALL
SDSEKGEGEAKEGDNDESKKRSIEGGKQGASIKKVKKDKGGSATGKSAKPEANIVSTAPR
VKPELPLPVIPTEVEHSILEDLRNRVQLSSVALPSVSFYTFINTHNGLSCSSISHDGSLV
AGGFSDSSLKVWDMAKLGQQSSSSMSQDENDTSQNQQIPGQGGGKRQYTLFQGHSGPVYA
ASFSPIGDFILSSSADSTIRLWSTKFNANLVCYKGHNYPVWDVQFSPLGHYFASCSHDRT
ARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVFVGH
RSMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSCEGSVIAS
GSADSTVKLWDVNTSTKVPRTEDNKSGNASRLRSLKTLPTKSTPVSALRFSRRNLLFAAG
ALAKSV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcaaatagttggttatgtaactgcgtatctgaagaagaaaggattcaaa
caaactgagaaggtttttcaggaagaatttcaactcaacaagactatctccccttccgat
tctgatattggcaaccaaatcctttctttcgctcacttggagagtggtcctgccagattc
catgatggatatagcagactaagaacatggacttactcttcactagatttgtacaagtat
gagttgcttcgtgtgctttatccagtattcatccattgcttcatggatcttgtagctaaa
gcgcatattcaggaagctcggaactttttcaataccttccgtgaagaccatgaaatgatg
cacttacgtgaccttcaaaaacttgaaggagttctttctcctactcatctggaggaaatg
gaatttgctcattcactaaggcagagcaaattcaatattaagatatgcgagtattcctat
gagcttctgttgcaacatttgcacagtacgcaatctaccactatacttggtatcatcaat
gagcacattaacttccaagttactcccggacaacctagttcaatttctgatgatccagag
gctgttacccttactggaagcagccaggatgcaattaaccagataaatcagaaagaagta
cattgggggttgcttgaagactctctggaagaacggctggagaaggctggggccttgctt
tcagattctgaaaaaggtgaaggagaagcaaaagagggggataatgacgagagtaagaaa
agatcaattgaaggaggaaagcaaggtgcttcaatcaaaaaggtaaaaaaggacaagggc
ggaagtgcaactgggaaaagtgcaaaacctgaagctaacattgtatctacagctcctcga
gtcaaaccagaactccccttgcccgtaatcccaactgaggtagaacactccatccttgaa
gatttacggaaccgtgtacaacttagtagcgttgcactgccatcagttagcttttacaca
tttatcaacacacacaatggtttaagctgttcatcaatatcccatgatggatccttggtt
gctggaggattttctgactcatcgctaaaggtttgggatatggcaaagcttggacaacag
tcatccagttctatgtcacaggatgagaatgacacatcacaaaaccaacaaatccctgga
caaggtggtgggaaaagacagtatacattgtttcaaggtcattcagggccagtttatgca
gcttcatttagtcctattggggattttattctttcatcctcagcagactcaacaattcga
ctatggagcacaaagtttaatgccaatcttgtttgttacaagggtcacaattaccctgtc
tgggatgttcagttcagtccactagggcattattttgccagctgctcacatgacagaact
gctagaatttggtccatggacaggatacagcccttaagaataatggcagggcacttgtct
gatgttgattgcgtgcaatggcatgccaattgcaattacattgctactggctccagtgac
aaaacagttcgactatgggacgttcagagtggggagtgtgtccgggtttttgttggtcac
aggagtatgattttgtctttggcaatgtctcctgatggtcgctatatggcatccggtgat
gaagatggcacaatcatgatgtgggacctctctagtggccgctgtctcacacctttgatt
ggtcacacgtcatgtgtttggtcacttgctttcagctgtgaaggttctgttatagcatct
ggatctgctgactctactgtaaaattatgggatgtaaatacgagcacaaaggttccaagg
actgaagataataaaagtgggaatgctagcagactcagatcactgaaaaccctgccaacc
aaatctactccagtttcggcattgcggttttctcgaagaaatcttctgtttgccgctgga
gctcttgcaaaaagtgtctga
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