Lupinus angustifolius (narrow-leaved blue lupine): 109344085
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Entry
109344085 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109344085
03009 Ribosome biogenesis [BR:
lang03009
]
109344085
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109344085
Spliceosome [BR:
lang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109344085
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
90S particles
Helicases
109344085
Pre-60S particles
109344085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
109344085
NCBI-ProteinID:
XP_019438242
LinkDB
All DBs
Position
LG03:25554938..25559689
Genome browser
AA seq
548 aa
AA seq
DB search
MGCSNLFSNAAVYVSLTTKYNNHSFSFSLTPSSTTSPTQVTRVITNNDSSLKPSFGRLKP
QKLKPLIHKTKHQKSSSNSNRNRNRDKDDDDNGDEEEDNSNAASHFKASKGRGWGDGGGS
YRAESSQTYLRKTTPDTNFFSLKSFTDLGYSHYMIQSLKKLSFTSPSHIQAMAFAPVIGG
KTCVVADQSGSGKTLAYLVPIIQRLRQEELDGHSKSSSQAPRVVVLAPTAELASQVLDNC
RSMSKSGVPFKSMVITGGFRQRTQLENLKQGVDVLIATPGRFLSLIKEGLLQLTNLRCAV
LDEVDILFGDEDFEVALQHLINSSPVATQYLFVTATLPKDIYSKLAEVFPDCEMIMGPSM
HRISSRLEEVLVDCSGEDGQEKTPDTAFLNKKSALLQLAEETPVPRTIVFCNKIETCRKV
ENALTRFDRKGSNIQVLPFHAAMTQESRHASMKEFTRSPSKQVSQFMVCTDRASRGIDFA
GVDHVILFDFPRDPSEYVRRVGRTARGARGEGKAFIFVVGKQISLARKIMERNRKGHPLH
DVPSAYEL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggttgttcaaatttgttcagcaacgccgctgtttatgtttcactcacaaccaaatac
aacaaccactctttctctttctctttaaccccatcttctacaacctctccaactcaagtc
acgcgtgttataacaaacaatgattcttcactcaaaccaagttttggaaggcttaaaccc
cagaaactcaaacctcttatccacaaaaccaaacaccaaaaaagcagcagtaacagtaac
aggaacaggaacagggataaggatgatgatgataatggtgatgaagaagaagataattca
aatgcagcatctcatttcaaagcatcaaaaggaagaggatggggagatggtggaggatct
taccgtgccgaatcctcacaaacatatctaagaaaaacaactcctgatacaaactttttc
agtctcaagtcattcacagatttagggtacagtcactatatgattcaatccttgaaaaaa
ctctcttttaccagcccttcccatatacaggccatggcatttgcacctgttattggtgga
aagacttgtgttgtagctgatcaaagtggttctggaaagacattagcgtatcttgtacca
ataattcagcgtcttagacaagaagaacttgatggacatagtaaatcctcttcacaagct
cctagagttgttgtacttgcaccaacagctgagttagcttctcaggtcttagataattgt
cgatcaatgtcaaaatctggggttccattcaaatctatggttatcactggtggctttcga
caaagaactcagctggaaaatttaaagcagggtgttgatgtcttaattgctacacctggc
cgttttttgtccctgataaaggaaggcctgttgcagttaacaaatctaagatgtgctgtg
ttggatgaggtagatatactatttggtgatgaagactttgaagtagctctccaacacttg
attaattcttcaccagttgctactcaatatctgtttgtgactgcaactttaccaaaagat
atttacagcaaactggctgaagttttccccgattgtgaaatgatcatgggacctagtatg
caccgtataagctctcgccttgaagaggtcctagtagattgtagtggagaagatggacaa
gaaaaaactcctgatacagcatttttgaacaagaaatctgctcttctgcagcttgcagag
gaaactcctgtccccagaactattgtgttctgtaacaaaatagaaacatgcagaaaagtt
gaaaatgcattgactcgttttgatagaaaaggaagtaatatacaagttctacctttccat
gctgccatgacacaagaatcacggcatgctagtatgaaagagtttacacgttctccatca
aaacaagtctcccagtttatggtttgcactgacagagcatcacgaggaatagactttgct
ggagtggatcatgtcatactatttgatttcccacgtgatccaagtgaatatgtgcggcgt
gttggaagaacagcgagaggtgctagaggagagggcaaggcatttatctttgtggttggg
aagcaaatctcgcttgcacgcaaaataatggaaagaaatcgcaagggtcacccactgcat
gatgtaccctcagcttatgagctatga
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