Lupinus angustifolius (narrow-leaved blue lupine): 109345040
Help
Entry
109345040 CDS
T04664
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109345040
09122 Translation
03013 Nucleocytoplasmic transport
109345040
03015 mRNA surveillance pathway
109345040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109345040
03041 Spliceosome [BR:
lang03041
]
109345040
03009 Ribosome biogenesis [BR:
lang03009
]
109345040
03012 Translation factors [BR:
lang03012
]
109345040
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109345040
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109345040
mRNA cycle factors
Stress granule specific factors
109345040
Spliceosome [BR:
lang03041
]
Complex C
Other components
EJC/TREX
109345040
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
90S particles
Helicases
109345040
Translation factors [BR:
lang03012
]
Eukaryotic type
Initiation factors
eIF-4
109345040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-GeneID:
109345040
NCBI-ProteinID:
XP_019439335
UniProt:
A0A4P1RNA3
LinkDB
All DBs
Position
LG04:complement(1625410..1631472)
Genome browser
AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRAALQPEDADFETTEGVKAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKSSMIALTVCQIVDTSVREVQALIVSPTRELASQTEKV
ILAIGDFINIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMAEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacatcggtggtccctgctaaccggcggagagcggcgttgcaacctgaggat
gcggatttcgagacgacggagggagtaaaagcgatagggagcttcgaggagatgggaata
aaagacgatttgttacgagggatttaccaatacggtttcgagaaaccttctgctattcag
caacgggccgtgacgccaatcatacagggccgtgacgtcatcgctcaggctcagtctggt
accggaaaaagttccatgattgcactcactgtatgtcagattgttgatacctccgttcga
gaggtgcaagctttaatagtgtcacctacaagggaactggcttcacagactgaaaaggtt
atattggctattggtgacttcataaacatacaagcacatgcatgcgttggtggtaaaagt
gtgggagaagatataaggaagcttgagtatggagttcatgttgtatctggaactccaggc
cgagtttgtgacatgatcaaaaggagaacattgcgcacaagagctattaagttgctagtt
ttggatgaatctgatgaaatgttgagcagagggtttaaagatcaaatttatgatgtgtat
agatatctcccaccagaccttcaggtggtgttgatttctgctaccctccctcatgaaata
ctggagatgacaaataagttcatgacagatccagtaagaatccttgtaaaacgtgatgag
ttgacattggagggtatcaagcaattttttgttgctgtcgagagagaggaatggaagttt
gatactctgtgtgatctttatgatactctcactatcactcaagctgttatattctgtaac
actaagcgaaaggtggactggttaactgaaaaaatgcgtaacaacaattttactgtctca
tcaatgcatggagacatgcctcagaaagaaagagatgcaattatggcagagtttcgtgct
ggtacaacccgtgtgctaataactacagatgtttgggctcgtggacttgatgtacagcag
gtttctctagttatcaactatgaccttccaaacaatcgagagctttacattcatcgaatt
ggacgctctggacgttttggacgcaagggtgttgcaataaactttgttaagagtgatgat
atcaagatcttgagagacattgagcaatattacagtactcagattgatgaaatgccaatg
aatgttgccgatcttatatga
DBGET
integrated database retrieval system
