Lupinus angustifolius (narrow-leaved blue lupine): 109345095
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Entry
109345095 CDS
T04664
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109345095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lang03400
]
109345095
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109345095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
NYD-SP28
Motif
Other DBs
NCBI-GeneID:
109345095
NCBI-ProteinID:
XP_019439430
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All DBs
Position
LG01:1286875..1294737
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AA seq
943 aa
AA seq
DB search
MPENFDQLHNKLPDLKLDSKQAQGFLSFYKTLPNDPRAIRFFNRRDYYTAHGENATFVAK
TYYHTTTALRQLSNGPDSLSSVSVSKNMFETIARDLLLERTDHTLELYEGSTSNWKLVKS
GTPGNIGSFEDVLFANSEMQDSPAVVALSLYFRENGCTVGLGFVDLTRRVLGMAEFLDDS
HFTNAESALVALGCKECILPIECGKSVENRVLHDALTKCGVMLTERKKTEFKTRDLVQDL
GRLVKGSLEPVRDLVAGFEFAPGALGALLSYTELLADESNYGNYTLRRYNLDNYMRLDSA
AMAALNVLESKTDANKNFSLFGLMNRTCTVGMGKRLLHMWLKQPLVDVIEINSRLDVVQA
FVEDALLRQDLQQHLKRISDIERLVHNLLKRRAGLHHIIKLYQSSIRIPYIKSALENYDG
QFSSMMRKRYLEPLELWTDDDHLNKFIGLVEVSVDLDQLENREYMISSSYDPRLSKLKEQ
QELIESQIHDLHRQTADGLDLPIDKALKLDKSTQFGHVFRITKKEEPKIRKKLSTQFIVL
ETRKDGVKFTNTKLKKLGDQYQRIVEEYKSCQKELVNKVVQTAATFSEVFDSLAELIAEL
DVLLSFANLASSCPTPYTRPYITSSNEGDIILEGSRHPCVEAQGLVDFMPNDCKLIRGKS
WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVKLIKAPTLFAT
HFHELTALALKNLRDDQQKQIVGVVNYHVSANIDASTRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVIALAMEKAAELEDFSPSAIYLTDTIKEVGSKRKRVAFEPSEIIQGSARARQ
LFEAFLALPMGSMDRRKSFEQVRKLTHKLEKDAENCHWLQRFF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaacttcgatcaactccacaataaactccccgatcttaaactagattctaag
caagcacaagggtttctatcattttacaaaaccctacctaatgatccaagagcaattcgt
tttttcaatcgccgggattactatactgctcatggtgagaatgcaacttttgttgctaag
acctactaccacactactactgctttgcgacaactgagtaatggaccggattctctttct
agtgtaagtgtcagtaagaacatgtttgaaacaattgcccgtgatctacttttggagaga
acagaccatactctggagctctatgaaggaagtacttctaattggaaactggtcaaaagt
ggaacacctggtaatattggcagttttgaagatgttctttttgctaactctgaaatgcaa
gattctccggctgttgttgcgttgtcactttacttccgtgaaaatggttgcactgttggg
ttaggatttgttgatctaactaggagagtacttgggatggctgaattccttgatgacagc
cacttcactaatgcggagtcagcattggttgctcttggctgcaaagagtgcattctgcct
attgagtgtggtaaatctgtcgaaaatagagtgttgcatgatgcattgactaaatgtggt
gtgatgttaactgagagaaagaaaactgagttcaaaacaagggatctagtacaggatctt
ggcaggcttgttaaaggctctcttgaaccagtacgagatttagtggctggatttgaattt
gcacctggtgctttgggggcattattatcttatactgagttgcttgctgatgaaagcaat
tatggaaattatacacttcgtaggtacaatcttgacaattacatgagattagactccgca
gccatggcagctcttaatgttctggaaagcaaaactgatgcaaacaaaaatttcagtttg
tttggtctcatgaacagaacttgtacagttgggatgggaaaacggttattgcacatgtgg
ctaaaacagcccttagtagatgtaatagaaattaattccaggctggatgtagtacaagca
tttgtagaggatgctttgcttcgccaagatctgcaacagcatctaaaaagaatatcagac
attgagcgattggtgcacaatcttctgaagcgaagagctggcctgcatcatattattaaa
ctttatcagtcaagcataagaataccttacatcaaaagtgctctggaaaattatgatgga
caattttcctcaatgatgaggaaaagatatttggaacctcttgagttatggactgatgat
gatcacctaaacaaattcattggacttgtggaagtttctgttgaccttgatcaactggag
aacagggaatacatgatttcttcaagttatgaccctagactgtctaaacttaaggagcag
caggagttaatagaaagccaaatacatgacttgcatagacaaactgctgatggtcttgat
ctgcctatagataaagcattgaagttagacaagagcactcaatttggacatgttttcaga
atcacaaagaaagaagagccaaaaataaggaaaaaactcagtacccagttcattgtactg
gaaacccgtaaagatggagtgaaatttaccaacacgaagctcaagaaactgggggaccag
tatcaacggatagttgaggagtacaagagttgtcaaaaagagttggttaataaagtagtt
caaactgcagcaacattctctgaggtttttgactctttagctgaattaatagctgaactg
gacgtgttactaagcttcgctaatttggcttctagctgtcctactccctacacaaggcct
tacatcacttcatcgaatgaaggagatattattttagaaggcagcagacacccttgtgtg
gaggcacaaggcttggtggattttatgccaaacgattgtaagcttatcagaggaaaaagc
tggtttcaaataataacagggcctaacatgggtgggaagtcaacattcatccgacaggtg
ggtgttaatattttgatggcacaagttggttcctttgttccttgtgacaaagccagtata
tctatccgtgattgcatttttgcccgggttggtgctggtgactgccaacttcgtggagtt
tctacctttatgcaagaaatgcttgaaactgcatcaatattaaaaggagccacagacaag
tccttgataatcattgatgaattgggacgtgggacatcaacttatgatggatttggtcta
gcatgggccatttgtgagcacattgttaaattgatcaaagcgcctactttgtttgctact
cactttcatgaactgactgcattagcccttaagaacctaagagatgatcaacagaagcaa
attgttggtgtggtaaactatcatgttagtgcaaatattgatgcatcaactcgcaagcta
actatgctatacaaggttgaaccaggagcttgtgatcaaagttttggtattcacgtggct
gaatttgcaaacttccctgaaagtgttattgccctagctatggaaaaggctgcggaattg
gaagatttttctccttctgcaatatacttaactgatactattaaggaggtgggttctaaa
cgtaagagggtagcatttgaacctagtgaaataattcaagggtctgcaagggctcgccaa
ttatttgaagcatttcttgctttgccaatgggtagcatggatagaaggaaaagttttgaa
caagtaaggaagttgacacataagttagagaaggatgcagaaaactgtcattggctgcaa
cggttcttttag
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