Lupinus angustifolius (narrow-leaved blue lupine): 109345181
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Entry
109345181 CDS
T04664
Name
(RefSeq) probable ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109345181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109345181
03400 DNA repair and recombination proteins [BR:
lang03400
]
109345181
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109345181
Messenger RNA biogenesis [BR:
lang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
109345181
DNA repair and recombination proteins [BR:
lang03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
109345181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
CP2
Motif
Other DBs
NCBI-GeneID:
109345181
NCBI-ProteinID:
XP_019439561
LinkDB
All DBs
Position
LG04:complement(4128472..4139078)
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AA seq
906 aa
AA seq
DB search
MTLRFSSLPTMESMSSVLKKYFGFADYRPYQKDVIQKIIEKKDCLVVMATGSGKSLCYQV
PPLVVKKTGIVVSPLISLMQDQVMALKQRGVRAEYIGSTQMDNTIQTRAEHGQFDILFMT
PEKACTISSSFWSNLLKEGISLLAVDEAHCISEWGHDFRVEYKQLDKLRVFLPDVPFVGL
TATATEKVRFDIITSLKMNNPYVSVGSFDRANLFYGVKLFNRGQSFVDELVQDISKQLSS
GGSTIIYCITIKDVEQIFKSLAEAGIEAGMYHGQMNKKAREESHRLFVRDELQIMVATIA
FGMGIDKPNVRQVIHYGCPKSIESYYQESGRCGRDGIASACWLYYTRRDFNLGEFYCQDL
KSESQKKAVMESLRAAERYCVLTTCRRKFLLGYFGENFSADRCGNCDNCTVSKKERDMSR
EAFLLMACIHSCHGKWGLNMPIDILRGSRAKKIVEAQFDKLPLHGLGKTYPSTWWRALGN
QLISHGYLKETVVDFYRFISVDAKGETFLASSTPDYQPRLVLSLTAEMLGEEENGSTQEE
FKTLATSESEGFSEAERQLYQRLLEERLKLARSVGTAPYAICGDQTIRKITLTRPSTKAR
LANIDGVNQHLVTKYGDQFLQVIQKLSQELNLSSDKEATVHTNEVRKVSLVTNQSRKLPP
AKLEAWRMWHEDGLSIQMIANFPGRSAPIKEQTVAEYLLEAAQDGLPFDWTRYSEMIGLT
KEIILQIQGAISKVGSTEKLKPIKNELPEDISYQHIKTYLTMLNCGVSSEAIQPGDHYAG
KDDELVNNEASISSKSLIEKCDLTTNDIPSGAVNGGYQLRKLPFTCERELTSKRQKVVEA
EDINSIQLKATESSIVEWLKNLDEGATLIDILKHFKGSNEDSVVELLNCLEGDFSIYKKG
SLYKIM
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgactctgaggttctcttctcttcccaccatggagagtatgtcttccgttctcaagaaa
tattttgggtttgcagattatcggccttatcagaaagatgttattcagaagattattgag
aaaaaggattgtttggtagtcatggctactggtagtggaaaatccttgtgctaccaggta
cctcctttggttgttaagaagactggaatagttgtcagccctttgatatcattgatgcaa
gaccaggtaatggctttgaaacagcggggtgtcagagctgaatatattggaagcactcag
atggataacactattcagaccagagctgagcatggtcaatttgacattctgttcatgact
cctgagaaggcatgtacaatttcttccagtttctggtccaacttgctaaaggaaggaatt
agtcttctcgctgttgatgaagcacattgcatttcagaatgggggcatgattttagggtg
gaatacaagcaattggacaagttacgtgtttttctgccagatgttccttttgttggtcta
actgcgactgctactgaaaaggttcggtttgacatcatcacttctctgaagatgaacaac
ccttatgtttcagttggttcatttgatcgcgcaaatcttttctatggtgtcaaactattt
aaccgtggacaatcttttgttgatgagcttgtgcaagatatttcaaaacaactttctagt
ggtggttcaactataatttactgcataacaatcaaagatgtagagcagatattcaagtca
ctagctgaagcaggtattgaggccggaatgtaccatggccaaatgaacaaaaaagctcga
gaagagtctcacagattatttgttagagatgaattgcaaatcatggtggctactattgct
tttggcatgggcatagataagcctaatgtaagacaagtaattcactacggttgccctaag
agtatagagtcctactaccaagaaagtgggcgatgtggtagagatggtatagcttctgct
tgttggctttactacacaagaagggactttaacctgggcgaattttactgtcaagattta
aaatcagaaagccaaaaaaaagctgttatggagtcactgagggctgctgaacgatattgt
gtactgacaacatgcagacgaaagtttttgcttggatacttcggggaaaatttctcagct
gatagatgtggaaactgtgataactgcacagtctcaaagaaggaacgtgacatgtcaaga
gaagcatttcttctaatggcttgtattcactcatgccatggaaaatggggccttaacatg
cccattgacatcctgcgtgggtctcgagccaagaaaattgtcgaagctcagtttgacaag
cttccacttcacggactagggaaaacatacccatcaacttggtggagagcacttggaaat
caacttatttctcatggttatttgaaggagactgttgttgatttttacagatttataagt
gttgatgcaaagggagaaacttttttggcctcttctacaccagattaccaacctcgctta
gttttgtcattgactgctgaaatgcttggagaagaggaaaatggaagcacacaagaagaa
ttcaaaactctagccacttcagaatcagagggtttttccgaggctgagagacagctctac
caaaggcttttagaagaaagattaaagcttgcgagaagtgttggaacagctccatatgcc
atatgcggtgatcaaacaatccggaaaattacgttgacaagaccgtctacaaaagcaagg
ctagcaaacattgatggtgtgaatcagcacctagtaacaaaatatggcgatcaatttctt
caagttattcagaaactgtcacaagaactaaacctatcgtcggataaggaagcaactgtg
cataccaatgaagtaaggaaagtatctctagtaaccaaccaatccaggaaattgccacca
gcaaagcttgaagcatggagaatgtggcatgaagatggtctttctattcagatgattgct
aactttccaggtagatcagctcctataaaagaacaaactgttgctgaatatcttctagaa
gctgcccaagatggattaccttttgattggactagatactccgagatgataggactgaca
aaagagatcatattacaaattcagggtgctatttcaaaggttggatctacagaaaagcta
aagcctataaaaaatgaattgccagaagatataagttatcagcacatcaagacttatttg
acaatgttaaattgcggagtatcctcagaagccattcaacctggagaccactatgctggg
aaagatgacgaacttgtaaacaatgaagcttccatttcttccaagagtctgattgaaaaa
tgtgacttaacaacaaatgacataccttctggagctgtcaatggtggttaccagctacgg
aagcttccattcacctgtgagagggaactcacgagcaagcgtcaaaaagtggtcgaggcg
gaggatataaattcaattcaattgaaggctacagaaagttctatagtagagtggctgaag
aaccttgatgaaggggctactttgattgatattttgaagcacttcaagggatcaaatgaa
gattctgtggttgagttgctgaattgtcttgagggtgacttttctatatataagaaaggt
agcttgtataagattatgtga
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