Lupinus angustifolius (narrow-leaved blue lupine): 109345508
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Entry
109345508 CDS
T04664
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109345508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109345508
03019 Messenger RNA biogenesis [BR:
lang03019
]
109345508
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109345508
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109345508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_12
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
109345508
NCBI-ProteinID:
XP_019440105
UniProt:
A0A4P1RLZ7
LinkDB
All DBs
Position
LG04:8193726..8204232
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AA seq
680 aa
AA seq
DB search
MEDSDGVLNFDFEGTLDAAPLPSITTTVPSSSAPLIHHDASSVASSIPNGNAVAITPHSA
SDHPSANVQGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQD
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYNYNGPNKF
FQQRGASYNQQVERSQFPQGVNSTNQGVAAKPLVAEPGNAQQQLQVQQSQQQVNQSQMQS
PANGQTNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV
ENVILIFSVNRTRHFQGCAKMTSRIGGSVSGGNWKYAHGTAHYGRNFSVKWLKLCELSFH
KTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAMSIAAESKREEEKA
KGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGQGVGPPSQGRGRGRGMMWPPHMPL
GRGARPMPGMPGFNPGMMGDGLPYGPDGFGMPDLFGMGPRAFAPFGPRFSGDFGGPPAAM
MFRGRPTQPGMFPGGGFGMMMNPGRPPFMGGMGVGGGNPSRGGRPVNMPTMFPPPPPPPQ
NANRVPKRDQRTNDRNDRHGSGPEQGRSQDMQSQTGGPDDDMQYQQGYKANQDDQNEDSE
SEDEAPRRSRHGEGKKKRDA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccgacggagtcctcaacttcgatttcgagggcactctcgacgccgctcct
ctcccctccatcaccactaccgtcccctcctcttccgctcctctcatccaccacgatgcc
tcttctgtcgcttcctccattcccaacggcaacgccgtcgccataacccctcattctgcc
tccgaccacccctccgccaatgtccaagggcggcggagcttccggcagacggtgtgcagg
cattggcttcgaagcctgtgcatgaagggagacgcgtgcgggttccttcatcagtatgat
aaggcgaggatgccggtgtgccggttttttcggctttatggagagtgccgggagcaggat
tgtgtttataaacacaccaatgaagatatcaaggagtgtaacatgtacaagttaggattt
tgtcccaatgggcctgattgccgatatagacatgcaaaatctcctggacctccacctcct
gttgaagaggtccttcaaaagatccaacatttgtataattataatggccccaacaaattt
ttccaacaaaggggtgctagctataatcaacaagttgaaagatctcagtttcctcaagga
gttaattctacaaatcaaggcgtggctgcaaaaccattggtagcagagccaggtaatgcc
cagcagcagctacaagttcaacagtctcagcagcaggtcaaccagagccaaatgcaaagt
cctgctaatggccagaccaaccaagccaatagaactgcaacccctttacctcaaggaata
tctaggtattttattgttaaaagttgcaatcgtgaaaatcttgagttatctgtgcaacaa
ggagtatgggcaactcaaaggagcaacgaatccaaactaaatgaagcttttgactctgtg
gaaaatgtgatattgattttctcagtcaatcgaactcgacatttccagggttgtgcaaag
atgacatccagaattggtggttctgtttccgggggaaactggaaatatgctcatggaact
gcacattacgggcggaatttctctgttaaatggttaaagttatgtgaactgtcgttccac
aaaacacgccatttacggaatccatacaatgagaacttaccagtgaagataagtagagat
tgtcaagagctggagccctctattggtgagcaattagcatccttgctttatctggagcca
gacagtgagctcatggctatgtcaattgcagcagagtctaaacgagaagaagagaaagca
aagggagtaaatccagataatggaggagaaaatccagatattgtaccatttgaagacaat
gaagaagaagaagaggaagagagtgacgaagaggaggagagctttggtcaaggtgttggg
ccacctagtcaaggcagaggaaggggcagaggcatgatgtggccgcctcacatgcctctt
gggcgtggagccagacctatgcctggaatgccaggttttaacccaggaatgatgggtgat
ggattaccctatggacctgatggatttggtatgccagatctcttcggtatggggccccgt
gcttttgctccatttggtcctaggttctctggtgattttggagggcccccagcagccatg
atgtttcgtgggcgacctacacaacctgggatgtttcctggtggtgggtttgggatgatg
atgaatcccggacgccctccctttatgggaggaatgggggttggtggtggaaatccgtca
agaggtggtaggccagtcaacatgcctacaatgtttcccccacccccgcccccacctcaa
aatgccaaccgggtccccaaaagagatcaaagaactaatgaccggaacgataggcacggc
tcaggaccagagcagggcaggagtcaggacatgcagagtcaaactggcggacctgatgat
gacatgcaataccagcaaggatacaaggcaaatcaggatgatcagaacgaagatagtgaa
agcgaggatgaagcaccaagacggtcaagacatggagaggggaaaaagaaaagggacgcg
tag
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integrated database retrieval system
