Lupinus angustifolius (narrow-leaved blue lupine): 109345575
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Entry
109345575 CDS
T04664
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109345575
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109345575
Spliceosome [BR:
lang03041
]
Complex C
Other components
Complex C specific factors
109345575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_30
AAA_23
AAA_29
Cas3-like_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
109345575
NCBI-ProteinID:
XP_019440199
LinkDB
All DBs
Position
LG04:complement(9153471..9174749)
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AA seq
690 aa
AA seq
DB search
MSSQFWKPGTEKPRILEDEEGGVIFLSNSLSSSSSEKQRQRLPVYKYRNAILYLVESHGT
TIIVGETGCGKSTQIPQYLIEAGWGHGGRLIGCTQPRRLAVQAVASRVAQEMGVQLGEEV
GYTIRFEDVTKPDVTVLKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLL
KKIQRRRPELRLIIASATIEAKSMSDFFRVRKKRREPENEDSQLQLEPAILSVEGRSFNV
QINYAEEPVQDYVQAVVSTVLSIHEKESTGDVLVFLTGQDDIDAAIHLLNEEVQNNGKRS
SGLVLLPLYSGLPRAEQELVFSPTPRGKRKVVVSTNIAETSLTLEGIVYVVDSGFSKQRF
YNPVSDIENLVVAPISRASARQRAGRAGRVRPGKCYRLYTEEYFLNQMPNDGIPEIQRSN
LVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPIGFQVAEV
PLDPMIAKMIIASNQFGCSEEIITIAAVLSIQSIWISGRGIQKESDEAKLRFAAAEGDHV
TFLNVYKGFLQSSKSSQWCHKNYVNYQAMRKVIEVRQQLKRIAHRIGIVLKSCESDMQAV
RKAVTAGFFANACSLEPYSHNGMYKTLRGSQEVYIHPSSVLFRVNPKWVIYNSLVSTDRQ
YMRNVITVDPSWLLEAAPHFYQLQQSNPLF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacagttctggaaaccaggtaccgaaaagcctcgtatattagaagacgaagaa
ggtggtgttatcttcttatccaattcactctcatcatcttcttctgagaaacagaggcag
cgattacctgtgtacaagtatcgcaatgcaattctatacctagttgagtctcatggaact
acaataatagttggtgagacagggtgtggcaaaagtactcaaattcctcagtaccttata
gaagcaggttggggccacggtggccgtctcattggttgcactcaaccgcgccgtctcgcg
gttcaggccgttgcgtctcgggttgcacaagagatgggagttcaattgggtgaagaagtt
ggttacactattcgctttgaagatgttacaaaaccagatgtgactgtactgaaattttta
actgatggggttctactaagggagatgatggatgatcctcttttgaccaaatatagtgtc
ataatggtagatgaagctcatgaaaggtcaatttcaactgacattctacttggattattg
aaaaagattcaacgacgtcgacctgagttgcgattgattatagcttctgctactattgag
gcaaagtcaatgtctgacttcttcagggtgagaaaaaagcgccgagaacctgaaaacgag
gacagtcaattacaattggaacctgcaatcttatcagttgagggtagaagcttcaatgtg
caaattaattatgctgaggaacctgtccaagactatgttcaggctgttgtttcgacagta
ctctcgattcatgaaaaggaatccacaggagatgttctagtcttccttactggccaagat
gatattgatgctgctattcatttacttaatgaagaagttcaaaataatggcaaacgctct
tcagggttggttcttttgcctctttattcaggacttccacgtgctgaacaggagttagtg
ttttctccaactcctagagggaaaaggaaagtagtagtttctactaatatagcagaaaca
tcactcacactggagggcattgtttacgttgttgacagtggattctccaaacagcgattc
tacaatccggtttctgatattgaaaatctggttgtggcaccaatatctagagcttctgct
aggcaaagagctggtagggctggacgagttcgacctggaaagtgttacaggctatataca
gaagaatattttctaaatcagatgcctaatgatggaattccagagatacagagatcaaat
cttgtctcatgtgtaatccagttaaaggccttgggaattgataatatattgggctttgat
tggccagcatctccttctccggaagcaatgatccgagcattagaagttctttactcactc
ggggtcttggatgatgatgctaagcttacttcaccaattggatttcaagttgcagaggtt
ccgcttgatccaatgatcgcaaaaatgataatagcttccaaccaatttgggtgttcagag
gaaataatcacaattgctgctgttctttccatccaatctatctggatctcagggagaggg
atacaaaaggaatcagatgaagctaaattgagatttgctgctgcagagggtgaccatgta
acattccttaatgtatataagggatttcttcagtctagtaaatcttcacagtggtgtcac
aagaactatgtgaactaccaagcgatgaggaaggttattgaagttagacaacaactcaaa
agaattgcacataggataggcatagtcttaaaatcttgcgaaagtgatatgcaggctgtt
agaaaagcagtcactgctgggttttttgctaatgcttgcagtctagagccgtacagccat
aatgggatgtacaagacgttaagaggatcacaagaagtttatattcacccatcatccgtg
ctattcagggtaaatccaaagtgggttatttacaattctcttgtatcaactgatcgacaa
tacatgcgtaatgtcataactgtagatccgtcatggctattggaggctgctcctcacttc
tatcagttacagcaatctaatcctcttttctga
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