Lupinus angustifolius (narrow-leaved blue lupine): 109345877
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Entry
109345877 CDS
T04664
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109345877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lang03400
]
109345877
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109345877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
LBR_tudor
Tudor_KDM3B
Motif
Other DBs
NCBI-GeneID:
109345877
NCBI-ProteinID:
XP_019440676
UniProt:
A0A1J7HKR2
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Position
LG04:11877551..11886781
Genome browser
AA seq
1271 aa
AA seq
DB search
MAPSRRNINGRSPLVNPQRQITSFFTKSPSPILSNSTNNRNPNPNPNGGPATPSQPHKPL
LLIGASPPPSSDVVGRRINVYWPLDKAWYQGSVMSFDKISSKHLVRYDDGEEEALDLSKE
KIEWLQQNQNSSGKKKLKRLRKMVIEDDEVEEIHKHDDDELVVGDGDDSSDEDWGNNVVV
EDDDEGECEEDMELEVEDDEEDVAKSSTRKLSAKDEARKRKVGGMEKSESSKKSKSAGEV
QVSNKGGFKLSVLERNNVTNLETKKISNVTDNVAADDTSERFLAREAHKLRFLREDRRDA
KRRDPGDENYDSRTLYLPPDFLRSLSDGQKQWWDFKSKHMDKVLFFKMGKFYELFEMDAH
VGVKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS
KDKVVRREICAVVTKGTLTDGELLSANPEAAYIMALTEHCENHSNEISEHIYGVCIVDVA
TSRVILGQLKDDIECSALCCILSEIRPVEIVKPAKLLSAETERVLLKHTRNPIVNELVPI
VEFWDTDKTVDQLKKNYRRANNVSAENDWLDCLPDVLQELVKAGNDSRSALSALGGALYY
LKQAFLDETLLRFAQFELLPCTGFCDLATKPYMILDAAAMENLEVFENSRDGGYSGTLYA
QLNQCVTAFGKRLLKAWLARPLCHVESIKERQEAVAGLKGVNLPYTLEFRKALSKLPDME
RLLARIFSTSEASGRNANKVVLYEDASKKKLQEFISALRGCELMAQACSSLGVVLNYVES
RQLHHLLTPGKGLPDVCIDLNHFKDAFDWVEANNSGRIIPHKGADIEYDSACNAVKEIES
SLLKHLKEQRKILGDTSITYVTVGKDAYLLEVPENSRGNIPQNYELRSSKKGFFRYWTPD
IKKFLRELSQAESEKESLLRSTLQRLIGRFCEHHTKWRQLVSATAELDVLISLAIACDYY
EGPTCRPSFLGTLSAKEAPYLSAKSLGHPVLRRDSLGNGDFVHNDINIGGPDHASFILLT
GPNMGGKSTLLRQVCLAVILAQVGADVPAERFNLSPVDRIFVRMGAKDNIMAGQSTFLTE
LSETATMLSSATRNSLVALDELGRGTSTSDGQAIAGSVLEHLVRNVQCRGLFSTHYHRLA
IDHEKDPKVSLCHMACQVGGGNAGVEEVAFLYRLTPGACPKSYGVNVARLAGLPTSVLET
AAAKSREFEASYGKCRKMSSEANTSNQNWVDEMTLFMQKLNNVTTNLSCEETICDTLIEL
QDKARELLQQL
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtcgcgccggaacatcaatggccgatcaccactcgttaatccacaacgtcaa
atcacttctttcttcaccaaatctccttctcctattctctctaattccaccaacaaccgt
aaccctaaccctaaccctaacggtggccccgccacaccttcccagccgcacaagcccctc
cttctcatcggcgcgtctccgccaccttcctccgatgtcgttggccgaaggattaacgtt
tattggcctcttgacaaggcatggtaccaaggctctgttatgtcgtttgataaaattagt
tccaagcatttggttcgttacgatgatggtgaagaggaagcgttggatctttctaaggaa
aagatcgagtggcttcaacaaaatcagaattcctcgggtaagaagaaactcaaacgcctg
cgtaagatggtgatcgaggatgatgaggtcgaagagattcacaaacatgatgatgatgaa
cttgttgttggtgacggtgatgattcgagtgatgaagattggggaaataatgttgtggtt
gaggatgatgatgaaggagaatgtgaagaagatatggagttagaagtggaggatgatgaa
gaagatgtggctaagagttctacgcgaaagctaagtgcgaaggatgaggcgcgaaagcgg
aaggtaggtggaatggaaaaatcggagtcttcgaagaagagcaagagtgcaggggaagtt
caagtcagtaacaagggaggttttaagctctcggtattggagcgtaacaatgttactaat
ttggagactaaaaagatatcaaatgtcacggacaatgttgctgctgatgatacctctgaa
agatttttggcccgtgaagctcacaaattgcgcttcctgagagaagatcgcagggatgcc
aagcgaagggacccaggagatgaaaattatgattcaagaactctctacttgcctcctgat
ttcttaaggagtttgtcagatggtcagaaacaatggtgggatttcaagtcaaagcatatg
gataaagttttgtttttcaagatgggtaaattttatgaactttttgagatggatgcacat
gtaggagtgaaagagcttgacttgcagtatatgaagggagaacaacctcattgtggattt
ccggagaagaatttctctatgaatgtggaaaaactggctaggaagggttatcgagttctt
gttgttgagcagactgaaacgcctgaacagctggagcttcgccggaaggagaagggctcc
aaagacaaggttgtgagacgtgaaatatgtgcagtagttacaaaaggcacattaactgat
ggggagttgctgtctgcaaacccagaagctgcatatataatggcactgaccgagcactgt
gaaaaccattcaaatgaaatttcagagcatatttatggtgtttgtatagttgatgttgcc
acaagcagagtcattcttggacagcttaaggatgatattgagtgcagtgccttgtgctgt
atcttgtccgagatcaggccagttgaaattgtcaaacctgctaagctgctcagtgctgaa
acagagagagtactgctgaagcataccagaaatcctatagtgaatgaattagttccaatt
gtggagttctgggatactgacaaaactgtggatcaattgaagaaaaattacaggcgcgct
aacaatgttagtgctgaaaatgattggttagattgcctgccagatgttttgcaggagctg
gtgaaagcaggaaatgacagcagaagtgcactttcagcacttggcggtgctctctattat
ctgaaacaggctttcctagatgagacattacttagatttgcacagtttgagttacttcca
tgtactggtttctgtgatcttgctacaaaaccatatatgattcttgatgcagcagcaatg
gagaatcttgaggtttttgaaaatagccgagatggaggttattcagggacgctctatgcc
caattaaatcaatgtgttactgcatttggaaagagattgctaaaggcatggcttgcaaga
ccattatgtcatgtcgagtcaattaaggaacgccaagaagctgtagcaggtttaaaggga
gtaaatctaccttacacactagaatttcgaaaggcattatcaaagctacctgacatggag
cggttgcttgcacgcatcttctctactagtgaagctagtggaaggaatgctaataaagtg
gttctctacgaggatgcatcaaagaaaaaactgcaagaatttatttcagctctgcgtggt
tgtgagctcatggcacaagcatgttcttcactaggtgttgttttgaattatgtcgaatct
agacaacttcatcatctattaacacctggtaaaggtcttcctgatgtctgcattgattta
aatcatttcaaggatgcctttgattgggtggaagccaataattcagggcgtataatacct
cataaaggagctgacatagaatatgactcagcctgtaatgcagtcaaagagatagagtcc
agcttgttaaagcatctcaaggagcaaagaaaaatacttggagacacatcaatcacttat
gtcactgttggtaaggatgcatatctgttggaagtaccagaaaattcgcgagggaatatt
cctcagaattatgagctacgttcatccaaaaaaggcttctttaggtattggactccagat
attaaaaagttcttaagagagctctcccaagctgaatctgaaaaggaatcattgttgaga
agtacattgcagaggttaatcggccgtttttgtgaacatcacactaagtggaggcagttg
gtgtctgcaactgcagagctggatgttttgataagtttagctattgcttgtgactactat
gaaggaccaacatgcagaccaagtttcttaggcacattatctgcaaaagaagctccatat
ctctctgctaaaagtttgggacacccagtcctcaggcgtgattctttaggcaatggtgat
tttgtacacaatgacataaacattggtggtccagatcatgcaagctttattcttctaact
ggtcctaacatgggtggaaagtcaactcttcttcgccaagtttgcttggctgtgattttg
gcccaggtaggggctgatgtcccagcagaaaggttcaatttgtctcctgtggaccggata
tttgttcgaatgggtgccaaagataatatcatggctggccaaagtacctttttaactgag
ctttcagaaactgcaacaatgctgtcatcagccactcgcaattcattggtggcactggat
gaacttgggcgtgggacatcaacttctgatggacaagccattgcaggatcagtactagag
caccttgtgcggaacgtgcagtgtcgtggattgttttctacccactatcatagattagct
atagatcatgagaaagatcccaaggtctctctctgccatatggcatgccaagtcggtggt
ggaaatgcaggtgtggaagaagtcgcctttctttacaggctgacgcctggtgcatgcccc
aagagctatggtgttaatgttgcccgtttagctggacttccaacttctgtgcttgagaca
gctgctgccaagtccagagaatttgaggctagttatggcaaatgtagaaagatgtcttct
gaagcaaacacttccaatcaaaattgggttgatgagatgacacttttcatgcaaaaactg
aacaatgtcactacaaatttgagttgtgaagagaccatttgtgataccttaattgagctt
caggataaagcaagagagctcctacagcaactttaa
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