Lupinus angustifolius (narrow-leaved blue lupine): 109345938
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Entry
109345938 CDS
T04664
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109345938
03036 Chromosome and associated proteins [BR:
lang03036
]
109345938
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109345938
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109345938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HHH_9
Spt6_S1
HTH_44
Tex_central_region
Reo_sigmaC_M
Tex_N
S1
Motif
Other DBs
NCBI-GeneID:
109345938
NCBI-ProteinID:
XP_019440775
LinkDB
All DBs
Position
LG04:complement(14248243..14260211)
Genome browser
AA seq
2176 aa
AA seq
DB search
MGRKSVPNEQQEKIRRKGKQKAVTVEDSSDDEDDSLDEFEVDGFLVDDIEDEDNEENPKQ
TQKMAKRRRSLKNLVLDSDDLELIRENASINQENLGDRKLKRLKKVGTYTSDDGGSLFDE
YESMSNDDSDDDMEDFIVDEEVVYEKGDSLRQRKLEDPKHSFSHPKEAKNSFGKAGLPQK
HSREFQMHSTVPDDHNKHDSFIPTSTRTAGEGNSVDGADIPERMQIIEDNVGLVPVDRMS
IEEESFWILSQLASNINPLFSEAESCKLVETVKREDIVRFLELHHTEKYDIPFIAMYRKE
HCLSLLEDTKQDESENTWDNNDGKPKLKYHKILWVIKELDIKWLLLQKRKNTLMRYYDKY
FEEECQLSSLDEESSFRQQIFVSITNMLKKAETEREIDDIDMKFNLHFPQAEELFDSGYK
RPMRKSFYSNCNKAGLWKLARKFGNPEKLDSLVTLEKVGIDNEEDPEESPEEIASMYKCE
TFENSEAVLKGARHMAAVMLSCGIHFKKHIRGIFMNKALVSTSPTAQGNISIDSFHEFAG
VKWLKDKPILKFEDSQWLFIQKAEEEKLLQVTIKLPDDALNELTMTCNSAYLKHSEGTAA
KLWNEQRKLILQDALSNFLLPSMEKEARTLLNAKAKNWLLMEYGWQLWNRVSVAPYQNSL
ATYENKGSSTAKEQGVMACCLGNGKPGTTFVMLGSRGEVFDVMHAGSLALRSQNINDQQR
RKNDQERVLKFLTIHQPRVIVLGAANSSCIRLREDINEIISMMSEDNFEDGCQEMKGVPA
VVLGDESLPRLYEESEISMNQLPRQLGIVKRAVALGRYLLNPLAMIATLCGVKKEVVSWK
LYPLEKFLTNDEKLEIIEWVMTDITNQVGIDINLAIRHDWLMAPLQFISGLGPRKAGIFQ
RELLTGIDLRNRKDFTKLGLNTKKVFCNAVGFLQVSCDDPIFVDTVGNILDRTRIHPESY
YLAEELARAVHKRILESPDANVAEVNAIEYIHNDPKLLETFDLNEYADRFKTEKGECRRP
TLFDIRMELLHPFEDPRRPYNEPTQDEEYYMITGEIGNTVVEGKRVQAKVRHVQRQQAFC
VLDSGMTGVLCKDDFADDAENIFLTDKLHEGDVVTCKIMLIDKSRCRVNLTCKASEMKND
DNQSLDMDPYYCQENITLSSQLETVQKKELGNKHFMPRMISHSHFENVTADQAKEFLADK
DVGEYIFHPSSRGPCYLTLSLKFSCGIYVHKDIVEGGKNHDMKSLLGLGKTLKIGEETFE
GIDKVIGDYVNPLVVYLKAMINFRKFKKGSKAEVDELLKQEKEEYPKRIPYGFGISHEHP
GTFILSYIRSTKTHHEFIGIHPKGFKFRKQIFENLEQLVTYFQNHINDIVTAAKNQTTDG
SNRESISGGYNDRGDGRSGGFGRGSRGRGDRGGRGDRGGRGRGDRGRRGGRGRGFGRSES
RDDNDNDDGGFTSSKWGSGSNDVTDNSFAAGKSWGVGGSAEGNGSGEVGGWGTTGGEGKG
KQNSSAGGWGSTGTGHNNDGDTGTGWANANSSLKDNTGKSWGEGGPGEGSVGDTGWDNAN
SSARKDNIGKSWGKGGPGEGSGGGTGWANTNSSGQKDNIGKSWGGGGTDWSNANSSGQKD
NGGKSWGSAGTGWASANSSGSNDNIGKSWGGGGPGEGSDGGGGWHSGDGGPGQGRGRGRG
RGRGRGRGRWSQGDDDQGRGNENDVNDSYNGKWGNGGNDNSGSGGWKDNSGKSWGEDSPK
EGSGWGNGQGRGRGRGRGRGRRGNQGDDDQGRESESDMNRGSYSGKWGSNGDDHSGGGWA
NANSSGWKDDSSKSWGEGSGGGTGWTNTNSSGPKDNGGKSWGGGDTGSTGWANANSSGSK
DNTGKSWGEGSGGGTGWTNANSSGSKDNTGKSWGEGNGGGTGWANANSSGSKDNTGKSWG
EGSGGGTGWANANSSGSKDNTGKSWGEGSGGGTGWANANSSGSKDNTGKSWGEGSGGGTS
WDNANSLVQKDNSGKSLGQGGPGEGSGGGTDWANNAKSSSWKDNSGKSWGEAGSGGGSGG
SGTGWASNPKSSGCKDNNSGKSWAEGGSGEGSGGGGTGWGSNPKSSGWKDNSGKSWGEGG
SGEGSGGGTTGWANNAKSSDWKDNSGKSWGQGGSHGDASDSGWGQGRGRGRGRGGWRGSQ
GDGRGGGRWGGNSTNE
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaatcggttccgaatgaacaacaagagaaaatcagaaggaaagggaaacag
aaagctgttactgtagaagatagcagtgatgatgaagatgacagcttggatgaatttgag
gttgatgggtttctggttgatgatattgaagatgaagataatgaagaaaatcctaaacaa
acacaaaagatggcaaaaaggaggagatcattgaaaaaccttgtccttgacagtgatgat
cttgagttaatccgtgagaatgcgagcatcaaccaagaaaatttgggagatagaaaactc
aagaggcttaaaaaggttgggacatacacttctgatgatggaggatcactttttgatgaa
tatgaatccatgtctaatgacgattcagatgatgacatggaagattttatagtggatgaa
gaggttgtctatgagaagggagattctctcagacaaagaaagcttgaagatccaaaacat
tcattttcacatccaaaagaagccaagaatagttttgggaaagcaggcctgccacaaaag
cacagtagagaatttcaaatgcattctactgttcctgatgatcataacaagcatgattct
ttcatccctactagtacgcggactgctggagagggtaactctgtagatggtgcagacata
cccgagaggatgcagataattgaggacaatgtaggattagttccagttgacagaatgagt
attgaagaagaaagtttttggattctaagtcaacttgcatccaacataaatccattgttt
agtgaggctgagtcctgcaaactagttgaaacagtaaagcgggaagacattgttcgattc
ttggaattgcatcacacagagaaatacgacataccatttattgcaatgtaccggaaggaa
cattgcctcagtcttctagaagatacaaagcaggatgaatcagaaaacacttgggataat
aatgatggaaagcctaagctgaaatatcacaagatactctgggtaatcaaggaattggat
atcaagtggctgcttcttcaaaagcggaagaacacacttatgagatactatgacaaatat
tttgaggaagaatgccaactgtcttcccttgatgaagaatccagtttccgtcagcagatt
tttgtctccatcaccaatatgcttaagaaggctgaaacagaaagagagattgatgatatt
gatatgaagtttaatttgcattttccacaagctgaggagttatttgatagtggttataaa
aggcctatgcggaagtcattctattccaattgcaataaggctggactgtggaaacttgca
cgcaaattcggcaatcctgagaagcttgattctctagttactcttgagaaagtgggaata
gacaatgaagaagatccagaggaatctcctgaggaaatagcttcaatgtataagtgtgaa
acatttgaaaattcagaagctgtacttaaaggcgctaggcacatggcggcagttatgtta
agttgtgggatacatttcaagaaacatatccgtggcatatttatgaataaggctttagtc
tcaactagccctacagcgcaaggaaacatatcaatagattcctttcatgagttcgcaggt
gttaagtggctgaaggacaaacctatcttgaagtttgaagattcacagtggcttttcatt
cagaaggctgaagaagagaagcttctccaggttaccataaagttacctgatgatgccctt
aacgagttgacaatgacctgcaatagtgcttatctcaaacatagtgaaggaacagctgcc
aagctttggaatgagcagcgtaaattaattttgcaggatgctctctccaattttcttttg
ccttctatggagaaggaagcacggacattgttaaatgctaaagccaaaaactggttatta
atggagtatgggtggcagttgtggaacagagtctctgttgcaccatatcaaaactctctt
gcaacatatgaaaacaagggcagtagtactgcaaaagagcagggagttatggcatgttgt
ttgggaaatggaaagcctggcaccacctttgtcatgttgggctccagaggtgaagttttt
gatgtgatgcatgctggatcacttgcactgcgatctcaaaatattaatgaccaacagcgc
aggaaaaatgatcaagagcgtgtcctcaagttcctaacaatccaccagccacgtgttatt
gttctaggagctgctaattcgtcctgtataaggctgagggaagacattaatgagatcatt
tccatgatgtcggaggacaattttgaagatggctgtcaagagatgaaaggagtaccggca
gttgtattaggggatgaaagtttacctcgtctttatgaagaatcagaaatttctatgaat
cagcttcccagacaacttggcattgtcaagagggctgtggcccttggtcgttaccttcta
aacccactggcaatgattgcaactctctgtggtgtcaaaaaagaggtcgtgtcttggaag
ttgtaccccctggagaagttcctaacaaatgatgagaagctggagataattgaatgggtc
atgacagatatcacaaatcaagtaggtatagacataaatttggccatcagacatgactgg
ctcatggctccgctgcagtttatttccggtcttggaccccggaaagctggtatttttcag
agagaattacttactggaattgatctgagaaatcggaaggacttcactaaacttggattg
aacacaaagaaggttttctgcaatgctgttggctttttgcaggtttcttgtgatgaccca
atttttgttgacactgttggcaacattctggatcgtaccagaattcatccagagtcatat
tatcttgctgaggaattagctagagctgttcacaaaagaattctggaaagtccagatgct
aatgttgccgaagtgaatgcaattgaatatattcacaatgatccaaaactgctagaaact
tttgatttaaatgaatatgcagatagattcaaaactgaaaaaggagagtgcagaaggccg
actctttttgacataaggatggaattgctccacccatttgaagatcctaggaggccttat
aacgaaccgactcaagatgaggagtactatatgataactggagaaattgggaatacggtt
gttgaaggaaaaagagttcaagcaaaagtccgccatgtgcagcgccaacaggcattctgt
gtgcttgactctggaatgactggagttctttgtaaggatgactttgcagatgatgcagag
aatatattcttaacagataaattgcatgaaggtgatgtggttacgtgcaagatcatgcta
attgataagagtagatgccgggtcaacttgacttgtaaagcaagtgagatgaagaatgat
gacaatcaaagtcttgacatggatccatattactgtcaagaaaacatcactttatcaagc
cagctagaaacagtgcaaaaaaaggagcttggaaataaacatttcatgcccaggatgatt
tctcattcccattttgaaaatgtaactgcagatcaagcaaaagagttccttgcagataag
gatgttggggaatatatttttcacccaagttcaaggggtccatgctatttgaccttgtct
cttaagttttcttgtggaatttatgtacacaaagacattgttgaaggtggaaagaatcat
gatatgaaaagcttgcttggacttggaaagacattaaaaataggagaggaaacatttgag
ggcatagataaggttattggagactatgtcaatccattggtagtttatctgaaagctatg
attaatttccgaaaatttaagaagggctcaaaagccgaggttgatgaactattaaaacaa
gagaaggaagaatatccaaagaggataccatatggctttggtatttcacatgagcatcct
ggcactttcatcttgtcttatatcagaagtacaaaaacacatcatgagtttattggtatt
catccaaaaggattcaagtttcggaagcaaatattcgaaaatcttgagcaactggtgaca
tattttcagaatcatattaatgatattgttacggcagcaaaaaaccagacaacagatgga
tcaaatagggagtccatatctggaggttacaatgaccgtggagatggtcgtagtggtgga
tttggtcgtggcagccgtgggcgtggggatcgtggtggacgtggtgatcgtggtggtcgt
ggccgtggtgatcgtggccgccgtggtggtcgtgggcgtggatttggtagatctgaatct
cgtgatgataatgacaatgatgatggtggttttactagttcaaagtggggctctggttcc
aatgatgttactgataattcctttgctgctggtaagagttggggagtgggtggttctgct
gaaggcaatggaagtggtgaggtagggggatggggaacgacaggtggcgaaggtaaaggg
aaacaaaacagttcggctggtggatggggcagtactggaactggtcataacaatgatggt
gatactggtactggctgggctaatgccaattcttctttgaaagataacactggcaagagt
tggggtgagggtggtcctggtgaaggcagtgtcggtgatactggctgggataatgccaat
tcttctgcccggaaagataacattggtaagagttgggggaagggtggtcctggtgaaggt
agtggtggtggtactggctgggctaatacaaattcttctggccagaaagataacattggc
aagagttggggtggtggtggtactgactggtctaatgccaattcttctggccagaaagat
aacggtggcaagagttggggtagtgctggtactggttgggctagtgccaattcttctggt
tcgaatgataatattggcaagagttggggtgggggcggtcctggtgagggtagtgatggt
ggtggtgggtggcattctggtgatggtggtccgggacaaggaaggggaagggggaggggc
agaggaagagggaggggaagggggagatggagccaaggtgatgatgaccaaggacgtgga
aatgagaatgatgtgaacgacagttataatggtaaatggggcaatggcggaaatgataat
tctgggagtggtggttggaaagataacagtggtaagagctggggtgaggatagtcctaaa
gaaggtagtggttggggaaatgggcaaggaaggggaagaggaagggggagggggagagga
aggagagggaaccaaggtgatgacgaccaaggacgtgaaagtgagagtgatatgaacagg
ggtagctatagtggtaaatggggcagtaatggagatgatcactccggtggtggttgggca
aatgccaattcttctggttggaaggatgacagtagcaagagttggggtgaaggtagtggt
ggtggtactggctggactaataccaattcttctggcccgaaagacaacggtggcaagagt
tggggtggtggtgatactggcagtactggctgggctaatgccaattcttccggttctaaa
gataacactggcaagagttggggtgaaggtagtggtggaggcactggttggactaatgca
aattcttctggttcgaaagataacactggcaagagttggggggaaggtaatggtggaggt
actggctgggctaatgccaattcttctggttctaaagataacactggcaagagttggggt
gaaggtagtggtggaggcactggttgggctaatgccaattcttctggttctaaagataac
actggcaagagttggggtgaaggtagtggtggaggcactggttgggctaatgccaattct
tctggttcaaaggataacactggcaagagttggggtgaaggtagtggtggaggtactagc
tgggataatgccaattctttggtccagaaagataacagtggcaagagtttgggccaaggt
ggtcctggtgaaggtagtggtggtggtactgactgggctaataatgcaaagtcttctagc
tggaaagataacagtggcaagagttggggtgaggctggttctggtggaggtagtggcggc
agtggtactggctgggctagtaatcccaagtcttctggttgtaaagataacaacagtggc
aagagttgggctgagggtggttctggtgaaggtagtggcggtggtggtactggctggggt
agtaatcccaagtcttctggttggaaagataacagtggcaaaagttggggtgaaggtggt
tctggtgaaggtagtggtggtggtactactggctgggctaataatgccaagtcttctgat
tggaaagataacagtggcaagagttggggtcagggtggtagccacggagatgcctccgat
agtggttggggacaagggagaggaaggggaaggggaaggggaggatggagaggtagccag
ggtgatggccgaggaggtggtcgctggggtggaaacagtacaaatgaatga
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integrated database retrieval system
