Lupinus angustifolius (narrow-leaved blue lupine): 109346368
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Entry
109346368 CDS
T04664
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109346368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109346368
03012 Translation factors [BR:
lang03012
]
109346368
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109346368
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109346368
Translation factors [BR:
lang03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109346368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
AAA_11
ATPase
T2SSE
NPHP3_N
Dicer_dimer
AAA_23
Motif
Other DBs
NCBI-GeneID:
109346368
NCBI-ProteinID:
XP_019441434
LinkDB
All DBs
Position
LG04:complement(23760855..23774552)
Genome browser
AA seq
1197 aa
AA seq
DB search
MLSTITISYMQQQPLKTLKPSIPPFLAMKDRPPLTSYGNIYVPPHHRLRSIVVAPAKYNS
PAAPKLRENQIPLQNPMTTAPAINALQPQVPSKAKPRYVSAYDDDEVSEEGSEREFEPPS
LSVTSASPNYNTGDWKQKLTMLLNDNSKQELISRDKKDRRDFDQIAVWASRMGLYSHMYT
KVVVFSKVPLPNYRYDLDDRRPQREVRLPITIFKQVDAHFEEYLSQKSRMKEGFSDSSFA
RSSSGSSTGTDEGLFEQYEPLASSKGVTDKILWLRSSQMRDQQQVWQESPEGKRMLEFRS
TLPAYKEKEAILSVISSNQVIIISGQTGCGKTTQIPQFILESEIQSVRGAACNIICTQPR
RISAMSVSERVAFERGEKLGESVGYKVRLEGTKGRDTHLLFCTTGILLRRLLADRNLKGV
THVIVDEIHERGMNEDFLLIVLKDLLPHRPELKLILMSATLDAELFSSYFNRAPIMNIPG
FTYPVKTHFLENILDMTGYRLTPYNQIDDYGQERMWKMNKQTPRKRKSQIASTVEDAIGA
ADFNDYSPQTQESLSCWNPDCIGFSLIEYLLCNICKNEKPGAVLVFMTGWDDISSLKEKL
LTHPVLGDPSRVLLLTCHGSMASSEQRLIFEEPENGVRKIVLATNIAETSITINDVVFVL
DCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGECYHLYPSCVYDAFAEYQ
LPEILRTPLQSLCLQIKSLRLGSISEFLARALQSPEILAVQNAIEYLKTIGALDENENLT
ILGRYLTMLPMEPKLGKMLILGSIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEAAKSQ
FSGAYSDHLALVKAYEGWKYAEIDQGGYEYCWKNFLSAQSMKAIDALRREFLCLLKDSEL
VDNNAASCNTWCHDVNLIRAVICYALYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNAR
ETTIPYPWLVFNEKIKVNSIFLRDSTAVSDSAMLLFGGSLSKGDADGHLKMLGGYLEFFM
EPAVADMYQSIRREFDGFIQGKLRFPRMDTHLYHELLSAVRLLLSNDKCEGRFVFGRKLL
KKPSKPSMTVASHPALVSRTETGPGGDNSKSQLQTLLTRARYAAPVYKTQQLKNNQFQST
VEFNGMQIMGQPCNNKKSAEKDAAAAALQWLIGGKQTGNEYINHVSMLLKKSKKDHN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaactatcaccatctcttatatgcaacagcaaccactcaaaaccctaaaacct
tcaattccaccattcctcgccatgaaggaccgtcctccgctgacatcctacggcaacatc
tacgttccgccgcaccaccgcctccgctccatcgtcgtcgcccccgccaaatacaactct
cccgccgctcctaagctccgtgaaaaccaaattccacttcaaaaccctatgaccaccgct
cctgctattaatgctctgcaacctcaagttccctccaaggcgaagccgcgctatgtttct
gcttatgatgacgacgaagtttctgaggaaggctctgagcgtgaatttgagcctccttca
ctatccgtcactagtgcttcccccaattacaatactggtgactggaagcagaaattaacc
atgctcttaaatgacaatagtaagcaagagttgatctcaagggataaaaaggataggcgt
gattttgaccaaatagcggtttgggcaagcagaatggggttgtatagccatatgtataca
aaagtcgtggtcttcagtaaggtcccacttccaaactatagatatgatttggatgaccgg
cggccacagagggaggtgagattgccaattacaatttttaagcaagttgatgcacatttt
gaggaataccttagccaaaagtccaggatgaaggaaggcttttcagattcatcatttgca
agatcaagcagtggcagtagtactggtacagatgaaggactttttgagcaatatgagccg
ctagcgtccagtaagggtgttacagataaaattctctggctgagaagctcacaaatgcgt
gatcagcaacaagtttggcaggaatctcctgaaggaaaaagaatgctagaatttcgtagc
actctccctgcttataaagagaaagaagctatattgtcagtcatatcaagtaaccaggta
attatcatttcagggcaaacaggttgtggcaagacaacacaaattcctcaatttattctt
gaatctgagatacaatcagttcgtggagctgcttgtaatatcatatgcacacagccaaga
cgcatttcagccatgtctgtttcagagagggttgccttcgaaagaggggagaaattgggt
gaatctgtcggatataaagttcgtctggagggaacgaaaggaagagatactcatcttctc
ttttgcaccacgggaatcttactaagaagattgctagctgatagaaatttaaaaggtgta
actcatgttattgtggatgagattcatgagcgtgggatgaacgaagatttcctgcttatt
gtccttaaagatctccttccccatcgaccagaactgaaattgattttgatgagtgcaacc
ctagatgcagagctcttctcttcttactttaacagggctccaataatgaatattccgggc
ttcacataccctgttaaaactcattttttggagaacattcttgatatgacgggctataga
ttgaccccttataatcaaattgatgattatggtcaagaaaggatgtggaaaatgaacaaa
cagaccccaagaaagaggaaaagccaaattgcttccactgtagaggatgcaattggagct
gcggatttcaatgattacagcccacagacacaggagtctttgtcatgttggaatcccgat
tgtattggttttagtctcattgaatatctcttatgcaatatatgcaaaaatgaaaaaccg
ggtgccgttttggtttttatgaccggatgggatgatataagctctctgaaagagaagctc
ctcacacatcctgtcttgggagatccaagccgagttctgttgcttacttgccatggctca
atggctagttcagagcagagattaatatttgaagagcctgaaaatggagtgaggaaaata
gtcctagcaacaaatattgctgaaacaagtatcacgataaatgatgttgtttttgttctt
gactgcggaaaggcaaaagaaacgtcatatgatgctctgaacaacacgccttgtttgctt
ccaacatggatctctaaggtttctgctcaacaaagaagaggaagagctggtcgtgttcaa
ccaggagagtgttaccatctctatcctagttgtgtatatgatgcttttgcagagtatcaa
ttgccagaaattttaaggacacctttgcaatctctctgtctgcaaatcaaaagtctaaga
cttggaagtatatcggagttcttggctagggctttgcagtctcctgagatacttgcggtg
caaaatgcaattgaatatttaaaaacaattggggctttggatgagaatgagaatctgact
attctgggacgttacctgacaatgcttcccatggaacccaagcttggcaagatgcttata
ttaggttctatcttcaattgcctggatcccatactaactgttgctgctggccttagtgtg
agagatccttttctaacaccattggataaaaaagatcttgcagaggcagcaaaatctcaa
ttctctggtgcttacagtgatcaccttgcacttgtaaaggcttatgagggttggaagtat
gctgaaatagaccagggtggatatgaatactgctggaaaaattttctatcagcgcaatca
atgaaagctattgatgctcttaggagggagttcttatgcttgcttaaggatagtgaatta
gttgataacaatgcggccagctgcaacacatggtgccatgatgtgaatcttatccgggca
gttatttgctatgctctatatcctggaatttgctctgttgtgcataatgagaaatcattc
tctctgaagacaatggaggatggtcaagtgctgctatattcgaactcggtgaatgctcgg
gaaactacaattccatatccatggctagtttttaatgagaagataaaagtgaactcaatt
tttctccgcgactcaacagctgtgtctgattcggcaatgcttctgtttggtggaagctta
tctaaaggagatgctgatggtcacctgaaaatgttaggaggatatctggagtttttcatg
gagcctgctgttgctgacatgtaccaaagtataaggagagaattcgatggcttcattcag
ggaaaactacgtttcccgaggatggacactcatctgtatcatgagctcctatccgcagtg
cggttgctgctttccaatgacaaatgtgaaggcagatttgtatttggtcgcaagcttctt
aaaaaaccatcaaagccatctatgacggtggcgtcacatccagcattggtttcaaggact
gagacaggacctgggggtgataattctaaaagtcagctccaaaccttgcttacaagagca
agatatgctgcacctgtctacaagactcaacaattgaagaacaatcaatttcagtccaca
gttgagttcaacggaatgcagataatgggtcaaccttgtaacaataagaagagtgcagaa
aaagatgctgctgctgcagcactgcaatggcttattggtggaaaacagacaggcaatgag
tatatcaatcacgtgtccatgctgctaaagaaaagtaagaaggatcacaattaa
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integrated database retrieval system
