Lupinus angustifolius (narrow-leaved blue lupine): 109346504
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Entry
109346504 CDS
T04664
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109346504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109346504
03041 Spliceosome [BR:
lang03041
]
109346504
03036 Chromosome and associated proteins [BR:
lang03036
]
109346504
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109346504
Spliceosome [BR:
lang03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109346504
Complex B
109346504
Complex C
U2 SnRNP specific factors
109346504
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109346504
TFTC complex
109346504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
109346504
NCBI-ProteinID:
XP_019441636
UniProt:
A0A4P1RL07
LinkDB
All DBs
Position
LG04:24954289..24959574
Genome browser
AA seq
1213 aa
AA seq
DB search
MYLYNLTLQQPTGIICAINGSFSGGKSQEIVVARGKVLDLLRPDDNGRIQTVLSVEIFGA
IRSLAQFRLTGAQKDYIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYFICGVDCGFENPI
FAAIELDYSEADLDSTGLAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHQEVRAVIPRRADLPIERGVLIVSAAMHKLKSMFFFLLQ
TEYGDIFKVTLEHDGDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKAI
GDDDDVEVSSATLEETRDGFKPVYFRPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSRLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIAKVGYNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVIVESDQGALTAEEREAARKECFETAQAGGNGTGSDPMENGGEDEDKD
DALSDEHYGYPKTESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGTL
LAVGTAKGLQFLPKRTLIAGYIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAGI
GPVLRLYDLGKRRLLRKCENKLFPNTIVSIHAYRDRIYVSDMQESFHYCKYRRDENQLYI
FADDCVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGKLN
GAPNKVEEIVQFHVGDLITSLQKASLIPGGGECIVYGTAMGSIGALHAFTSRDDVDFFSH
LEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPGE
ILKKLEEVRNKII
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatctcactctccagcaacccaccggcatcatctgcgccatcaatggc
agcttctccggcggcaagtcccaagaaatcgtcgtcgccagaggtaaagtactcgatctc
cttcgccctgatgacaatggccgcattcaaaccgttctctccgttgaaatctttggtgct
attaggtccttagctcaattccgtctcaccggtgctcagaaggattacatcgttgtaggt
tcagattccggtcgcattgtaatccttgattacaataaggagaagaatgtttttgataaa
atccatcaagaaacttttggtaaatcgggttgtcgccgcattgttccgggtcagtatctt
gctatagatccaaagggtagggctgttatgattggtgcttgtgaaaaacagaagcttgtt
tatgttttgaatagagatactgctgctaggttaactatttcttcgcctttagaggctcat
aagtctcacactttagtgtattttatttgtggggttgattgtggttttgagaaccctatt
tttgctgctattgagttggactactccgaggccgatttggattccactggtctggctgct
tctgaagctcagaagcatttgactttttatgagcttgatttagggctcaatcacgtgtct
aggaagtggtctgagcaggttgataatggtgccaatttgctggtcactgttcctggtggt
ggcgatgggccgagtggtgtgcttgtttgtgctgagaattttgttatttataagaatcag
ggacatcaggaagttagggctgtgattcctcggcgtgctgatttgcctatagagcgcggt
gttcttattgtctcggcggctatgcataagctgaagtccatgtttttcttccttcttcag
actgagtatggagatatttttaaggtgaccttggagcatgatggtgaccgtgtctcggag
ttaaagattaagtattttgatactattcctgttacggcttcaatgtgtgtgctcaagtcg
ggattcttgtttgcagcatcggagtttggcaatcatgctctgtatcagtttaaggcgatt
ggggatgatgatgacgtggaggtgtcatctgctactttggaggaaacacgggatggtttt
aaaccggtatatttcaggccgagaagactgaaaaatcttgtcaggattgatcaggttgag
agtttaatgccaataatggatatgaaagtcagtaacctctttgaggaggaaaccccacag
atttttactctctgtgggcgtggtcctcgttcgtctttgaggatcctgagaactggttta
gctgttagtgagatggcagtatcaaggcttcctggtatacctagtgctgtttggactgtg
aagaagaatgttattgatgagttcgatgcttatatcgttgtgtcattcacaaatgctaca
cttgtgctttccattggtgagacagttgaagaagttagtgacagtgggtttcttgatacc
acaccctcccttgctgtttctttgataggtgatgattctctcatgcaggttcaccctaat
ggtatcagacacattagggaggatgggcgtattaatgagtggagaactcccggaaagagg
acaattgccaaagttggatataatagacttcaagttgttattgcactgagtggaggggag
cttatatattttgaagtggatgttactggtcagttgatggaggttgaaaagcatgaaatg
tctggagacgttgcttgtttggacattgctccagtacccgaaggcagacaaagatcccgc
tttcttgcagtaggctcatatgacaagactatccgcatcttatcactggatcctgatgat
tgtatgcaggctcttagtgttcaaagtgtttcttcagctccagaatctcttctttttctt
gaagttcaagcatctgttggtggcgaggatggtgctgatcatcctgctagccttttcttg
aatgctggtttacagaatggtgtcttgtttagaactgtagtggatatggttacaggtcag
ctttctgattctcgttcccgattcttaggattgagagccccaaagttgtttcctattatt
gtcagaggcaagcgtgctatgctttgcttgtcaagtcggccatggcttggttatattcac
cagggacatttccttttaacaccactttcatatgaaacccttgaatatgctgcctcattt
tcgtctgaccaatgtgtggaaggtgtagttgccgttgctggtgaggcattgaggattttt
accattgaaagattaggagaaacatttaatgagactgtaattccattaagatatactcca
agaaagtttgtcctgcaacccaaacggaaacttttggtaatagttgagagtgatcaagga
gcattaactgcagaagagcgtgaagcggcaaggaaagagtgttttgagactgctcaagca
gggggaaatgggactggaagtgacccaatggagaatggtggtgaggatgaggataaagat
gatgcactctctgatgaacattatggttatccaaaaactgaatcagataaatgggtttcc
tgtattagagttcttgatccaaggacaggaaatacaacttgtcttctggagcttcaggag
aatgaggctgcattcagcatatgcacagtaaatttccatgacaaggaatatggaaccctg
ttagctgttggcactgcaaagggactgcaatttttgcccaaaaggactttaattgctgga
tatattcatatatataggtttgtagaggatggaagatctcttgaacttcttcacaaaact
caggtcgaaggtgttcctcttgctctatgtcagtttcaaggaagattacttgctggaata
ggacccgtgctcaggctatatgatttggggaaaagacgattgttaaggaaatgtgagaat
aagctattccccaacacaattgtctctattcatgcgtaccgtgatcgaatttatgtaagc
gacatgcaagagtctttccattactgcaagtataggcgggatgaaaaccagctttacata
tttgcggatgattgtgttccaagatggcttactgcatcttaccacatagattttgacacc
atggcaggcgcagacaagtttgggaatgtctattttgtgcgattgccacaggacgtttca
gatgagatagaagaagatcctactggtgggaggattaagtgggagcagggaaagctgaac
ggagctcccaataaggtggaagaaattgtacaatttcatgttggtgatctgatcacatct
ttgcaaaaggcgtctcttataccagggggtggagagtgcattgtatatggaacagctatg
ggaagtattggggcattgcatgcttttacttcacgagatgatgttgatttcttctctcat
ttggagatgcatttgaggcaggaccatccacctttgtgtggaagagaccatatggcgtat
agatctgcttattttcctgttaaggatgtgattgatggagatctatgtgagcaataccca
acattaccaatggatttgcagagaaaaattgctgatgaattggacagaacccctggagag
atactgaagaagcttgaggaagtacgaaacaagattatttga
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integrated database retrieval system
