Lupinus angustifolius (narrow-leaved blue lupine): 109347553
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Entry
109347553 CDS
T04664
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109347553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109347553
03012 Translation factors [BR:
lang03012
]
109347553
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109347553
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109347553
Translation factors [BR:
lang03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109347553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
Rad17
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109347553
NCBI-ProteinID:
XP_019443009
UniProt:
A0A4P1RJK4
LinkDB
All DBs
Position
LG05:complement(5012908..5023509)
Genome browser
AA seq
1031 aa
AA seq
DB search
MPHWLFRPNFYFLHFSLSIHTPAPKLFPSNHRISTSIMSYRPNYQGGGRRGGASSSGRGG
GRRGGGGGGRGGGRGEQRWWDPVWRAERLRQQQAEKEVLDENEWWDKIEKMAQGGEKEMI
IKRYFSIADQQTLADMAYKHELYFHAYNKGKTLVVSKVPLPDYRADLDERHGSTQKEITM
STAIERRVGNLLNNSQSVGSAPTSLPSASPDLGHKQSISTIKPVSSPQVDSSKEKHSVIL
KESQELMQAKDSLKEMKSFREKLPAFKMKSEFLKAVQKNQVLVVSGETGCGKTTQLPQFI
LEEEISCLRGADCNIICTQPRRISAISVAARVSAERGENLGGTVGYQIRLETKRSDETRL
LFCTTGVLLRKLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSA
TLNADLFSKYFGNAPTIHIPGFTFPVAEHFLEDVLEKTRYIIKSEFDNFEGNSRRRRKQQ
DSKKDTLTEMFEDIDVDTYYRKYSSGARKSLEAWSGSQIDLGLVEATIEYICRNEGGGAI
LVFLTGWDEISKLHDKLKVNNFLQDPGKFLILPLHGSMPTVNQREIFDRPPPNKRKIVLA
TNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGV
CYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQLGTVGSFLEKALQPPDPLSVQNA
IELLKTIGAFDDNEELTPLGRHLRNIPLDPNIGKMLLMGSIFQCVNPALTIAASLAYRNP
FVLPINRKEEADEAKQSFAGDSCSDHIALLKAYEGWKDAKRSGNEKQFCWDNFLSPVTLR
LIEDMRLQFLNLLSDIGFVDKSKGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRT
AFYTKEVGKVDIHPASVNAGVHLFPLPYMIYSEKVKTTSIYIRDSTNISDYALLLFGGNL
IPNKSGEGIEMLDGYLHFSASKSVIELIRKLRGELDRLLNRKIEEPGFDISAEGKGVVRA
AVELLHSQTMR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactggcttttccgccccaacttctacttccttcatttctctttatccatacac
acgcccgcacccaaacttttcccttctaaccaccgcatctccacctctatcatgtcctac
cgtcccaattaccaaggtggcggccgcagaggcggtgcttcatcttctggacgcggtggt
ggccgccgtggaggaggaggcggtggccgtggtggcggacgaggcgaacaaagatggtgg
gaccctgtttggcgagctgagcgcctcagacaacaacaagccgagaaggaggtgcttgat
gagaatgagtggtgggataagattgagaagatggcacaaggaggggagaaagaaatgatc
atcaagcgttactttagtattgcagatcaacaaaccctagctgacatggcttataagcat
gagttatacttccatgcttataataaggggaagactctcgttgttagcaaagttccattg
cctgattaccgtgcagatcttgatgaacgccatggatcaacacagaaggagattacaatg
tccactgccattgaaaggagagtgggaaatcttttgaataactcccagtcagtggggtca
gcgcctactagtttaccttctgcttcaccagacctgggacataaacaatcaataagtact
ataaaacccgtttcttctccgcaggttgattcttcaaaagaaaaacatagtgttatacta
aaggaaagtcaggaacttatgcaggcaaaggatagtttaaaggaaatgaagtcattcaga
gagaaacttcccgcatttaaaatgaagtctgaatttctgaaagccgttcaaaaaaatcag
gtattggtggtttcaggagagacaggttgtggcaaaacaacacagctacctcaattcatt
ctggaagaggaaatatcatgtttgcgtggagctgattgcaacataatttgtactcagcct
cgtcgtatatctgcaatttctgttgcagctcgagtatctgctgaaaggggagagaatctt
ggtggaacagttggataccaaatccgtcttgaaacaaaacgttctgatgaaacacgcctt
cttttttgcaccactggtgtattacttcggaagttggtccaagatccagagttgactggt
gttagtcatttgctggtggatgaaattcatgaaagaggcatgaatgaagactttttaatt
ataattttacgggaccttcttcctcgacgtccagatttgcgtctcattctaatgagtgca
actcttaatgccgacttgttctctaaatactttggaaacgccccaacaatacacataccg
ggatttactttccctgtggcggagcacttcctagaagacgtgttggagaaaactcggtat
atcatcaagtcggagtttgataattttgagggaaattcaaggagaagaaggaaacagcag
gattctaagaaggatactttgactgaaatgttcgaggatattgatgttgatacttattac
agaaagtacagctcaggtgctagaaaatctcttgaagcttggtctggttcacagattgat
ttgggtctggtagaggcaacaattgaatatatatgtcgtaatgaaggtggtggagcaatt
ctggtatttctaactggctgggatgaaatctctaagctacatgacaaacttaaagtgaat
aactttcttcaagaccctggcaagtttttgatccttcctcttcatggctcaatgcctact
gtcaaccaacgtgaaatatttgaccgtccaccccctaacaagagaaaaattgttctagca
actaatattgctgagagtagcatcaccatagatgacgttgtgtatgtcatagactgtggt
aaagcaaaggagaccagctatgatgctctaaataagcttgcctgcttgttaccatcatgg
atttcaaaggcttcagctcatcagagacgtggccgtgctggaagagtgcaacctggagtt
tgttataggttgtatccaaaactcatccatgatgcaatgcctcaatatcagttagctgaa
atcctccgaacaccattgcaagagttgtgcctgcatatcaagagtttgcaacttggaact
gttggatcgtttttagagaaggcgcttcagccaccagatcctctttctgttcagaatgct
attgagcttctaaaaacaattggagcattcgatgataatgaggagcttactccactgggt
cggcatcttcgcaacatacctttggacccaaatatagggaagatgcttcttatgggctct
atctttcagtgcgtcaatcctgccttgactattgctgcttctcttgcatatcgcaaccca
tttgtcttgcccataaatagaaaagaggaagctgacgaagcaaaacaatcttttgccggt
gattcttgcagtgatcacatagcccttcttaaagcttatgaaggatggaaggatgcaaaa
cgcagtgggaacgaaaagcaattttgttgggataattttctatcccctgtaaccttgcgg
ttgattgaagatatgagattacagtttctcaatttattatctgacattggatttgttgac
aagtccaagggtgctaatgcttacaaccagtacagtcatgatttggagatggtttgtgca
attctttgtgctgggctataccctaatgttgtgcagtgcaaaagaagaggaaaacggacc
gcattctacactaaagaagttgggaaggttgacattcatcctgcttctgtcaatgcagga
gttcatcttttccctctgccctacatgatatatagtgaaaaggtgaaaacaaccagcatc
tatattagagactccaccaacatttcagattatgccttacttctatttggtggtaatctc
atccctaacaaaagtggagaagggattgagatgcttgatggttatcttcatttctctgct
tcaaagagtgtcattgagttgatcaggaaattgcgcggtgagcttgacaggcttctaaac
agaaaaattgaagaaccaggatttgacatttctgctgaaggaaagggagtagttcgtgcc
gctgttgagttgctgcacagtcaaactatgagataa
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