Lupinus angustifolius (narrow-leaved blue lupine): 109348014
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Entry
109348014 CDS
T04664
Name
(RefSeq) uncharacterized LOC109348014
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109348014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109348014
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109348014
mRNA degradation factors
5'-3' decay
Decapping complex
109348014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109348014
NCBI-ProteinID:
XP_019443735
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Position
LG05:complement(20345791..20354355)
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AA seq
869 aa
AA seq
DB search
MVDMDAFGAEDLIQLRNVPKESAVFDASQYAFFGKNAAEEVELGGLEDLSAFESNEEFFP
NREEDEDVRSLSDIDDLTTTFLKLNKVVNGPRSPGIIGDRGSRENSISKWEQRDGVLNWI
DQNAYDSEGSLDGKSWSSRPHTSAAHLHESKSLYRTSSYPEQQMQQQQQHLQHCSSEPVH
NLLDQPFYDTAQDDGKRWSSQPYSSTEYLHEPKPLYRTSSYPEKQQELLRFSSEPILAPK
SSFTSYPPPGSGSQQASPSHNNTVPYHAGASLMELSSQNRFHFSNSALQLSGLNHESHFG
GNMRQLSTGSILNQRIQNQLINQAGLYSGDHSNLLSDMLQQQLHQNRGPMSPHLMSQLQH
QQHRLHRPVQQSAGYLSGFQTHLFNPHLSSSSSVINKYEHMLGLPEVRDHRPKSSLRGKR
SLRFSKQGSDASSQKSDSISLQFRSKHMTSDEIASVLRTQHAVTHSNDPYMDDYYHQACL
EKKHSLAKLKNPFCPTQIRDLPSRSRSNSETHAFLQVDALGRVLFSSIRRPRPLLEIDPQ
NYSFAGSSEQNVSEKTLEQEPLFAARVTIEDALCLLLDVDDIDRFLQVNQLPDGGTQLRL
RRQVLLEGLATSLQLVDPLGKNGNKVGLVAKDDLVFLRLVSIPKGRKLLTKYLQLLLPGS
ELMLIVCMAIFRHLRFLFSGLPSDSAASEFTSNFIKVVCQCIKGMDIGALSACLAAVVCS
AEQPPLRPLGNTSEDGASIILVSVLERATEILTDPHAACNYNTGNRSFWQDSFDEFFGFL
TKHCMNKYNSIMQSLLKQSAIDLDDIESDAAKAISKEMPVELLRASLPHTDDRQRKLLLD
FAQRAVPVVRFSSSAGDSGNHRSSGTVLS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgcttttggagctgaggatcttatacaactgaggaatgttcccaaa
gaaagtgcagtttttgatgcatcacagtatgcattcttcggtaaaaatgctgctgaggaa
gttgagttgggaggactagaggacttgtctgcttttgagtctaatgaggagttctttccc
aatagagaagaggatgaggatgtaagatctctttctgatattgatgatcttactaccact
tttttgaagttgaacaaggttgtaaatggaccaagaagcccaggcattattggtgatcgt
ggatcaagagaaaattctatctcgaaatgggaacaaagggatggtgttcttaactggatt
gatcagaatgcttacgatagtgaaggttctctggatggaaaaagttggtcatcacggccc
cacacttctgccgctcatttacacgaatcgaagtccttgtatagaacatcttcatatcct
gagcagcaaatgcagcagcagcagcagcacctccaacattgctcgagtgaaccagttcat
aatttacttgatcagcctttttatgatactgctcaagatgatggcaagcgatggtcatca
cagccttattcatcaaccgagtatttacatgaaccaaaacccttgtacagaacatcttca
tatcctgaaaagcaacaagagcttcttcgattttctagtgaaccaattttggcaccgaag
tcttcttttacttcttatcctccccctggtagtggatctcagcaggcctctccaagtcat
aataatacagttccctatcacgctggagcgtctctgatggaactatcatctcaaaatcgt
tttcatttctccaattcagcactacagttgagtggattaaaccatgagtcacattttggt
ggaaatatgcgccaattatctactggttccattcttaatcagcgaatacagaatcaattg
attaaccaggcaggattgtattctggagatcattcgaacctccttagtgatatgttgcag
caacaattgcatcaaaatagaggaccgatgtctcctcacttaatgtcccaattgcaacat
cagcagcacagactgcatcgtcctgttcagcaatctgcaggctacttatctggtttccag
acccatttatttaatccccatctttcttctagctcatctgtgattaacaagtatgaacat
atgcttggtcttcccgaggtcagagatcatagaccgaaatctagtctaaggggtaaacgt
agtcttcgtttctccaagcagggttctgatgctagtagccaaaagagtgatagtatttca
ttacagttcaggtcgaagcatatgacaagtgatgaaattgcgagtgttcttagaacacag
catgccgtgactcatagtaatgacccatacatggatgactattaccaccaagcatgtctt
gaaaaaaagcattctttggctaagttgaaaaatccattttgcccaacccaaataagggac
cttccttcacgatcccggtctaattctgagacacatgctttccttcaggttgatgctcta
gggagggttttattctcatctatccgtaggcctcgccctcttcttgagattgatccacaa
aattattcctttgctggtagctctgagcaaaatgtttcagagaagacccttgaacaggag
cctttgtttgcagccagagtcacaatcgaggatgctctttgtcttcttcttgatgtagat
gatattgaccgtttcctacaggttaatcagctgccggacggtggaactcaattaagacta
agacggcaggtcctgttggaaggactggcaacttcacttcaacttgttgacccactggga
aagaatggaaataaagttggccttgtagctaaggatgatctcgtttttttgcgattagta
tcaattccaaagggtcgtaagctccttactaagtatcttcagttgcttcttcctggtagt
gaacttatgctgatagtctgcatggccatctttcgccatttaagattcttatttagtggt
ctcccctcagattcggcagcttctgagttcacaagtaattttatcaaggttgtttgtcaa
tgtatcaaaggaatggacattggtgctcttagtgcttgtcttgctgcagtggtttgttcc
gcagagcagcctcctctacgccccctcggaaatacttcggaagatggtgcttcaattatt
ttggtttctgttctcgagagggctactgaaattctaactgaccctcatgctgcttgcaac
tacaacacaggtaatcgctcattttggcaggactcatttgatgaattctttggctttctc
accaagcattgtatgaataaatacaatagtatcatgcaatccttgcttaaacaaagtgca
atagatttggatgacattgaatcagatgctgctaaagctattagtaaggaaatgcctgtt
gaacttttgcgtgcaagtcttcctcacaccgatgaccgtcagaggaagttattactggat
tttgctcagcgcgctgtgcctgtggtcagatttagcagtagtgctggggatagtggtaat
cacaggagctcagggacagtgctaagttga
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