Lupinus angustifolius (narrow-leaved blue lupine): 109348261
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Entry
109348261 CDS
T04664
Name
(RefSeq) DNA damage-binding protein 1
KO
K12830
splicing factor 3B subunit 3
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109348261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109348261
03041 Spliceosome [BR:
lang03041
]
109348261
03036 Chromosome and associated proteins [BR:
lang03036
]
109348261
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109348261
Spliceosome [BR:
lang03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109348261
Complex B
109348261
Complex C
U2 SnRNP specific factors
109348261
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109348261
TFTC complex
109348261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
109348261
NCBI-ProteinID:
XP_019444143
LinkDB
All DBs
Position
LG05:complement(23685411..23699618)
Genome browser
AA seq
1108 aa
AA seq
DB search
MYVEAGPLAHDIVEVPNSCGLAFLFRAGDALLMDFRDPHNPCCVYRTSLNFLPNVVEEQA
YVEDSCKLHDIDDERFNVAACALLELSDYDPMCIDSDNGSTSSSYKYVCSWCWEPENGKD
PRMIFCIDSGEFFMIEIHFDPDDLNVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGML
LKLEDGRLCHSNPIQNIAPILDMTVVDYHDERHDQMFACCGVAPEGSLRIIRSGISVEKL
LRTAPIYQGVTGTWTVRMKVADSYHSFLVLSFVEETRILSVGLSFTDVTDSVGFHPNVCT
LACGLVSDGLLVQIHQSTVRLCLPTKAAHPEGIPLSSPICTSWSPHNVNISLGVVGHNFV
VVSTSNPSFLFILGVRLLSASHYEIYEMQHLELQNELSCISIPRQKNEQKQTHSPISANN
SCMSSFLSGVDNNKTFIIGTHKPSVEIWSFASDGVTVVARGTISLTNTMGTAITGCVPQD
VRLVFVDKYYVLAGLRNGMLLRFEWPAEPCPSSPLNVADTAPSSINLVNSVTNVFDKRSG
LPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHTARHSLSYTSISFQPSTH
VTPVSSVECPKGILFVAENSLHLVEMVQSKRLNVQKFHLEGTPRKVLYHNESRMLLVMRT
ELNCGTCLSDICCVDPLSGSVLSSFRLELGETGKSMELIRVGSEQVLVVGTSLSSGPAIM
PNGEAESAKGRLLVLCLDHVQNSDSGSMTFCSKVGSSSQRTSPFHEIVAYAPEQLSSSSL
GSSPDDNSSDGIKLDENEVWQFRLVYATTWQGMVLAICPYTDHYFLASAGNAFYVCGFPS
DHPLRVRRFAVGRTRFMVTSLTADSTRIAVGDCRDGILFYHYHEEARKFEQLYCDPSQRL
VADCILMDTETAVVSDRKGSIAVLCTEYLEDNASHESNLILSCGYFMAEVAMSIQKGSYS
YRLPADDVLQGGNTPKTNVDSMINTENTIIASTLLGSIIIFTPLSREEYELLEAVQARLV
AHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTNIQQQMILSSSEPPPKTVK
PSSKPFLPPHISVSQVVQLLERVHYALN
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttgaagctgggcccctagcgcatgacattgttgaagttcctaattcttgtgga
cttgcatttctattcagggctggtgatgctctcttaatggattttagagatcctcacaat
ccatgctgtgtctatagaactagcttaaactttttacctaatgtcgtggaagagcaggct
tatgttgaagactcatgtaaattacacgatattgatgatgaacgcttcaatgttgctgcc
tgtgctttgttggagctgagtgattatgatcctatgtgcatagacagtgacaatggcagt
acaagttcaagttataagtacgtatgctcatggtgttgggaacctgaaaatggaaaagat
cctaggatgatcttctgtatagatagtggagaattttttatgattgaaattcattttgat
cctgatgaccttaatgttaatctctctgagtgtctctataaaggtctaccctgtaaagca
cttttgtgggttgaaggcggatatctggctgctcttgtagaaatgggagatggcatgctc
ctgaaattggaagatggaaggctttgtcattcaaaccctattcaaaacattgcaccaatc
ttggacatgacagttgtggattatcatgatgagaggcatgatcaaatgtttgcttgctgt
ggtgtggcacctgagggttcattaaggattattcggagtggtattagtgtagaaaagcta
cttagaactgctcctatatatcaaggtgtaactggcacttggacagttcgaatgaaagtt
gctgattcatatcattctttcctagttctgtcgtttgttgaggagaccaggatattgtca
gttggcttaagttttactgatgtgactgattccgttggtttccatcctaatgtatgtact
ttggcatgtggccttgtgagtgatggtttgcttgttcagatccaccaatctactgttagg
ctttgtttgcctacgaaggctgctcaccctgaaggtatccctttgtcctctcctatttgc
acatcttggtccccacacaatgtgaatatcagtttaggggtggttgggcataactttgtt
gttgtatcaacatctaacccatcctttttgtttatccttggggttagattgctatcagct
tctcattatgaaatttatgaaatgcagcatttggaattgcagaatgaattatcatgcatt
tccatccctagacaaaaaaatgagcaaaaacaaacacattcacccatttcagcaaataat
agctgcatgtcctcctttttgagtggggtggacaacaataagacatttattattggcaca
cataagccttctgtggaaatttggtcttttgcatctgacggtgttactgtagttgctcgt
gggacaatttcattaacaaatactatgggaactgctataactgggtgtgtaccccaagat
gtgcgtcttgtatttgttgacaagtattatgttctagctggattgaggaatggaatgctc
cttcgctttgagtggccggcagaaccatgtccttcatcaccactaaatgtggcggatact
gctccatcttctataaatttggtaaattctgtgactaatgtttttgacaagaggagtggc
cttccttccactcttcaattgattgccattcgtcgcatcggcattactccagttttcttg
gtacccctgggtgacacacttgatgctgatataattgctctgagtgatagaccttggttg
ttgcatactgcaagacacagcctttcctatacttcaatctcatttcagccatccacacat
gtgactcctgttagctctgttgagtgtccaaaaggaatattatttgttgcagagaacagt
ttgcatctggtggagatggtgcagagcaagagacttaatgtgcagaagtttcatttagag
ggcactccacggaaggtcctgtatcacaatgaaagccggatgttgcttgtgatgaggaca
gaactcaattgtggtacatgtttgtctgacatatgttgtgtggatcccttaagtgggtca
gtgctgtcatcttttagacttgaacttggagaaacaggaaaatccatggaattaataaga
gttggaagtgagcaggtgcttgtagttggaactagtctgtcttctggtccagccataatg
cccaatggtgaagctgagagcgccaagggtcgtcttcttgttctctgccttgatcatgtg
caaaattcagatagtggttcaatgacattctgttcaaaagttgggtcatcatctcaaagg
acttcaccattccatgaaattgttgcatatgctcctgagcagctttcaagcagcagtctt
ggcagcagccctgatgacaatagttctgatggcatcaaacttgatgaaaatgaagtatgg
cagtttcgattggtttatgcaactacatggcagggaatggtacttgcaatctgtccttat
actgatcattacttcttggcatctgctggcaatgccttctatgtatgtggtttcccaagt
gaccatcccctaagagtgagaaggtttgctgtgggaaggacacgcttcatggtaacatct
ttgactgcagattctactagaattgcagttggtgattgccgtgatggtatccttttctat
cattaccatgaggaagcaagaaagtttgagcaactttactgtgacccatcacagaggtta
gttgctgattgcattcttatggatactgaaacagcagttgtttcagatcgcaaaggaagc
attgctgttttatgtacagaatatttggaagacaatgcaagtcatgaaagcaacttgata
ctaagctgtggttatttcatggctgaggtagccatgagcatacaaaagggctcatattca
tacagacttccagctgatgatgttttgcaaggtggcaatactcccaagacaaatgttgac
tcaatgataaatactgaaaatactattattgctagtactctgttaggaagcataatcatc
ttcacccctttatcaagggaagaatatgagctcttagaagcggtgcaagcaagacttgtt
gcccatcatctgacagcgcctgttcttggaaacgatcataacgagttccgtagccgtgaa
aatccagttggagtgccgaagatactcgatggtgacatgttgacccagtttttggagcta
acaaatatccagcaacagatgattttgtcttcttcagagccgccaccaaaaacagtaaaa
ccaagctcaaagccattcctacctcctcatatttctgtcagccaggtagttcaacttctt
gaaagagttcattatgcactgaactag
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integrated database retrieval system
