Lupinus angustifolius (narrow-leaved blue lupine): 109348340
Help
Entry
109348340 CDS
T04664
Name
(RefSeq) uncharacterized LOC109348340
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109348340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109348340
03019 Messenger RNA biogenesis [BR:
lang03019
]
109348340
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109348340
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
109348340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
Motif
Other DBs
NCBI-GeneID:
109348340
NCBI-ProteinID:
XP_019444274
LinkDB
All DBs
Position
LG05:complement(24641947..24647453)
Genome browser
AA seq
1017 aa
AA seq
DB search
MDPRRSLRGIEPGAKKPRLINDLDRGSVLDPRRLPQRASGHGGDDGGGYHPQPPPHQELV
VQYKTALAELTFNSKPIITNLTIIAGENLAAAKAVAGIVCSNILEVPSDQKLPSLYLLDS
IVKNIGRDYIKHFATRLPEVFCEAYRQVDPPVHSNMRHLFGTWKGVFPTQTLQMIEKELG
FTSAANGSASASVRSDSQSQRPPNSIHVNPKYLERHQQSIKTKGGVNDMNGAILKSKGEP
ERVLGSGRPPLDPRVTMQNNQRTNRDAFNDSVPEKSIGESFGGNEYSSDTSNNLSLVGRT
GGRITELGYDKPWYKAGGGFAETRSGQGNGFSVKPGFSNHEALKSVKLDAHRQPALNIAN
KRSSMMSSNWKNSEEEEFTWDEMNSGLTGHGALNVSDNLSTDTWTSDDENLVSLPKLREG
EDHLQIAQISNFKKQRPVFAGHQSLSWKMQDQHSIDKLKLKPGHSKELLSTLGGFQTNTN
SLSIGMGNRPFMPNATIGMAEVMRQQQFDSGGAESPSGQSPLREQSPSPPRIVRNPHPVR
SLAEQDRSHSLKTSQYLKALPSQHIKDPLPALPPNVQVDHLRKSQERDLQDPLSSATSFQ
PRLQQQKLGPSQTDVTVKTKKPPQSKVTLARETSEQLTTSSLSAAAVKSGTLSNKSTTSS
VHTTSSLDKRNLKPKFGVRPTQSSGPSPTTLISSVSVVALPSSLGPSNSDSPTLPKLPQR
KAGQPQRVSTQLPASSNVSNASNTTSNASTSNTSNPIANLLSSLVAKGLISSETESPTKV
PTEMPSRLEDQTESVAASSSLPVVPVSVSAAVPVSSSRDEVDDTTIPTLALSKSTSTEFI
NLIGFDFKPDIIREMHPHVISALLDDLPHHCTVCGIRLKLQEQFDRHLEWHAAREREQSG
LIMASRKWYAKSNDWIAGKAEYPSECELTDSVDVYDNETEENQLDTMVLADENQCLCVLC
GEVFEDVYCHERDAWMFKGAVYLNNTDGDGDSEIENRNLGPIIHARCLSENPISSVT
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcgtagatcattgaggggtatcgaacctggcgccaagaaaccccgattgatc
aacgacctagaccgcggttcggttctcgatccacggcggttacctcagcgagcttcgggg
cacggtggtgacgatggtggtgggtaccacccgcagccaccaccgcaccaagagcttgtg
gttcagtataagactgcgcttgctgaactcactttcaattcgaagcctattattacgaat
ttgactataattgctggagagaatctcgctgctgcgaaagcagttgctggcattgtttgt
tctaatattcttgaggttccaagtgatcaaaagctgccatccctttatctcttagacagt
attgttaagaatatcgggcgggattatataaaacactttgccaccagactacctgaggta
ttctgcgaggcatacagacaagttgatcctccagtacattcaaatatgagacatcttttt
ggaacttggaaaggagtctttcctactcagactcttcagatgattgagaaggaacttggc
tttacttctgctgccaatggttcagcgtctgcttcagtcaggagtgactcacagtcacaa
cgcccacctaatagcatccatgtgaatcccaagtatttagaaaggcatcagcagtccatc
aagactaaaggaggagtaaatgatatgaatggagctattttaaaatcaaaaggggagcca
gagagagttttgggttctggacgaccaccgcttgatcctagggttaccatgcaaaataat
cagcgcactaatagagatgcatttaatgattctgttcctgaaaagagcattggtgagtcc
tttggaggcaatgaatatagttctgatacttcaaataacttgagcttagttggaagaact
ggtggtaggatcactgagttaggatacgacaaaccttggtacaaagcaggtggtggtttt
gcagagaccagatcaggccaaggaaatggtttcagtgtcaagcctggcttttcgaatcat
gaagcactgaagtcggtcaaattggatgcacatcgtcagccagcactgaacatagctaac
aaaaggagcagtatgatgtcaagtaactggaaaaattctgaggaagaggagttcacgtgg
gatgagatgaactctgggttgactggtcatggtgccctcaatgtctctgacaacttgagc
acagacacatggacttcagatgatgagaatttggtaagccttccaaagttaagggaaggt
gaagatcacctccaaattgcacaaatatccaattttaagaaacagcgacctgtatttgcg
ggccatcaatcattgtcatggaaaatgcaggatcagcactcaattgataagttgaaactg
aagccaggtcactcaaaggaacttttgtccactcttggtgggtttcaaaccaatacaaat
tctttgtctattgggatggggaatcggcctttcatgccaaatgcaacaataggaatggcc
gaagttatgagacagcagcaatttgactctgggggagccgaatccccttctgggcagtca
cctttacgagagcagtctccatcaccaccacgaattgtgcgcaaccctcatccagtgcga
agtttggctgagcaagatcgttcccattctcttaaaacatctcagtatctgaaagctctg
ccaagtcaacatattaaagatcctttgcctgccctccctcccaatgtccaggttgatcac
ttgcgaaaatcacaggaaagggacttgcaggatccattatcttcggcaacttcttttcag
ccaaggcttcagcagcagaagctgggtccttctcagactgatgttactgttaaaactaag
aagccaccccagtctaaagttactctagccagagaaacttcagaacagttaaccaccagt
agtttgtcagctgcggctgtgaaaagtggaaccctctccaacaaatcaactacaagtagc
gttcatactacaagtagtctggataaaaggaatcttaaacctaaatttggggttaggcct
actcagtcgagtgggccttcccctaccacattaatttcttcggtgtctgtagttgcatta
ccatcttcattaggcccttcaaacagtgattcacctacgctgccaaagttacctcaacga
aaggctggacagccacagagggtgtctactcaattaccagcctcctctaatgtgagcaat
gcctcaaatacgacttcaaatgccagcactagtaatacgtcaaatccaattgccaacctt
ttgagctcattagttgcaaaaggtttgatatcttcagaaacagagtcaccgactaaggta
ccaactgagatgccgagtcgattggaagaccaaacagaaagcgttgctgccagtagctct
ttgccagttgttccagtttctgtttctgcagctgtcccagtatcatcttccagagatgag
gtagatgatactacaatacccacacttgccttatctaaatcaaccagcacggaatttata
aatctcattggctttgattttaagcccgacataatccgagaaatgcatccacatgtaatt
agtgctttgctggatgatctcccacatcattgcacagtttgtggtattaggcttaaactg
caagaacagttcgatagacacttagagtggcatgctgctagagaaagagaacaaagtggt
ctaattatggcatcaagaaaatggtatgcaaaatcaaacgattggattgctggcaaggct
gagtatccatctgagtgtgagctaactgattctgtagatgtatatgacaatgaaactgag
gagaatcaattggatactatggttctagcagatgaaaaccagtgcttgtgtgtactgtgt
ggcgaggtatttgaagatgtgtactgccatgaaagggatgcgtggatgttcaaaggggct
gtttacttgaacaacacagatggcgatggtgatagtgagattgaaaatagaaacttgggt
cccatcattcacgctagatgcttatcagagaacccaatatctagtgtcacttag
DBGET
integrated database retrieval system
