Lupinus angustifolius (narrow-leaved blue lupine): 109349386
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Entry
109349386 CDS
T04664
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109349386
09123 Folding, sorting and degradation
03018 RNA degradation
109349386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109349386
03041 Spliceosome [BR:
lang03041
]
109349386
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109349386
mRNA cycle factors
Stress granule specific factors
109349386
Spliceosome [BR:
lang03041
]
Complex C
Other components
Complex C specific factors
109349386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_ACIN1
RRM_MUD2_C
RRM_3
RBD_DEAH11
RRM_RdRP1_2
RRM_7
RRM_MARF1
BRAP2
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
109349386
NCBI-ProteinID:
XP_019445700
UniProt:
A0A1J7IC25
LinkDB
All DBs
Position
LG06:6859710..6865257
Genome browser
AA seq
652 aa
AA seq
DB search
MAQIQVQQQSPVPVPPSQNGVASGAPNAFLVTTSLYVGDLDFNVNDSQLYDLFNQVGQVV
SVRVCRDLTTHCSLGYGYVNFSNPQDAARALDVLNFTPLNNKPIRVMYSHRDPSIRKSGT
ANIFIKNLDKMIDHKGLHDTFSTFGQILSCKVATDASGQSKGYGFVQFDSEEAAKNAIDK
LNGMLLNDKQVYVGHFLRKQDRHNAPSKTKFNNVYVKNLSESVTDDDLKKFFGEYGTITS
SVVMRDGDGKSKCFGFVNFENPDEAAKAVESLNGKKFEDKEWYVGKAQKKSEREQELKGR
FEQSIKETVDKYHGVNLYLKNLDDTISDEKLKELFSEFGTVTSGKVMRDPSGLSRGSGFV
AFSTPDEASRALAAMNGKLIAGKPLYVALAQRKEERRARLQAQFSQMRPVSATPVAPRMQ
LYPPGAPGLGQQFLYGQGPPAIIPPQAGFGYQQQLVPGMRPGGGPMPSFFLPMVQQGQQG
QRPGGRRGAGSVQQPQQPVPVLQQQMIPRGRVYRYPPGRNMQDAPLQGVGGGIIPVPYDI
GGLPIRDAVGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEM
DQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQPNIPADQLASLSLNDNIVS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattcaggttcagcaacagagtcctgtaccggttcctccttctcaaaacggt
gtcgcttctggtgctccgaacgcgttcctcgtaacgacgtcgttgtacgttggggatctt
gactttaatgtgaacgattcgcagctctatgatttgttcaaccaggttggacaagtcgtt
tcggttcgggtgtgtcgcgatttaaccacacactgttcactcggttatggttatgttaat
ttcagtaaccctcaggatgcggcaagagcattggatgtgctgaattttactccactgaat
aacaaacctattagggttatgtattctcatagggatcctagtattcgcaagagtggtact
gctaatatttttatcaagaatttggataagatgattgatcacaaaggcttacatgatacc
ttttctacctttggacaaattctttcctgcaaagtagcaactgatgcttctggccagtcc
aaaggctatggttttgttcagttcgacagtgaagaggcagcaaaaaatgctattgataag
ttgaatggcatgctgttgaatgataagcaggtttatgtaggtcatttcctaaggaagcaa
gatagacacaatgctcccagtaagacaaaattcaataatgtctatgtgaaaaacctatcg
gagtcagtgacagatgatgacttgaagaaattttttggtgaatatgggaccattactagt
tctgtagtaatgagagatggtgatgggaaatctaagtgttttggttttgtcaactttgaa
aacccagatgaggcagctaaagctgttgagtcactcaatgggaagaagtttgaggacaag
gagtggtatgttgggaaagcccagaaaaaatctgaacgagagcaagagctcaaaggacgt
tttgaacagagtataaaagagactgttgacaagtatcatggtgtgaatttgtatctcaag
aacttggatgataccatcagtgatgaaaagctgaaagaactattctctgagtttggtaca
gttacttcaggcaaggttatgcgagacccaagtggactcagcagaggatcaggatttgtt
gcgttttcaacccctgatgaagcttctagagctcttgcagcgatgaatggtaaactgatt
gctggcaaacctctatatgttgcccttgcacagagaaaagaagagcggagagcaaggtta
caggcacaattttctcaaatgaggcctgtttcagctactcctgttgcacctcgtatgcaa
ctctaccctcctggtgctcctggtttagggcagcaatttttgtatggtcaaggaccccca
gccatcattcccccacaagctggatttggttaccagcagcagcttgttcctgggatgaga
cctggtggtggtccaatgccaagcttctttttaccaatggttcagcagggccaacaaggc
cagcgcccaggtgggcgccgaggagcaggttctgtgcaacaaccccagcagccagtgcca
gtgctgcaacagcagatgattccaagaggacgtgtctatcgttaccctcctggtcgcaac
atgcaagatgcccccctgcaaggagttggtggtggaataataccagtcccttatgatatc
ggtggtcttccaatccgggatgctgtggggcagccaatgcccattcaggccttggctaca
gcccttgcaaatgcccctcctgaacaacagaggactatgcttggtgaagctttgtacccg
ctcgtagatcagctggaacacgatgcagcagctaaggttacaggcatgcttttggagatg
gaccagcctgaggtattgcacctgattgagtcgcccgatgctctgaaggctaaagttgct
gaagccatggatgtgttgagaaatgttgcacaacagcaacctaacatacccgctgatcaa
ctagcttcactctctctcaatgacaatattgtctcttaa
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