Lupinus angustifolius (narrow-leaved blue lupine): 109349429
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Entry
109349429 CDS
T04664
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109349429
09123 Folding, sorting and degradation
03018 RNA degradation
109349429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109349429
03041 Spliceosome [BR:
lang03041
]
109349429
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109349429
mRNA degradation factors
5'-3' decay
Lsm complex
109349429
Spliceosome [BR:
lang03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109349429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
109349429
NCBI-ProteinID:
XP_019445777
LinkDB
All DBs
Position
LG01:complement(10436771..10451355)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFIRDADDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPEGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagaaaagaaacagtgcttgaccttgcaaaatttgtggacaaaggggttcaa
gttaagcttactggtggtagacaagtgacagggactcttaaagggtatgatcagttactt
aaccttgtccttgatgaagctgttgagtttataagagatgctgatgatcctctcaaaact
accgatcagaccagacgtcttggcctaattgtctgcagaggaactgctgtcatgctcgtg
tccccaaccgatggcacagatgagattgccaacccttttttgcaaccagagggggcataa
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