Lupinus angustifolius (narrow-leaved blue lupine): 109351615
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Entry
109351615 CDS
T04664
Name
(RefSeq) probable NOT transcription complex subunit VIP2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109351615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109351615
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109351615
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109351615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109351615
NCBI-ProteinID:
XP_019448671
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All DBs
Position
LG07:complement(1703383..1710275)
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AA seq
652 aa
AA seq
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MSGLLNSSLNGSASNHPDGAGRSFATTFSGQSGAASSAFHHSGANQGLHIIHGSFNVPNM
SSTLTSRNSIINNIPPGGVQQPTGNLSSGRFASNNLPAALSQLSHSGVTNRGGISVGNPG
FGSSTNGVGGSIPGTLPTSAAIGNRNAVPGLGVSQFLGNAGPQITSSVGNMVGGNIGRNG
GGLSMPGFASRLNLSTNSGSGGLGVQGQSRLMSGVLPHGSPQVISMLGNSYPSAGGPLSQ
SHVEAGSNLNSMGMLNDMNTNDSSPFDINDFPQLTSRPSSAGGHQGQLGSLRKQGIGIGP
IVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSADFS
SGGTYSSHRAQQQQHASSVSSGSVPFSPVNKQDLLHLHGSDIFPSSHSNYQSQSGPPGIG
LRPPSSANAISGMGSYDQFIQQYQQHQNQPQFRLQMSTVNQSFRDQGMKSTQTTQSTPDP
FGLLGLLSVIRMSDPDLTSLALGVDLTILGLNLNSTENLHKTFGSPWFDEQAKGDPEINV
PQCYYAKQPPDLHQGYFLKFSLETLFYIFYSMPKDEAQLYAAYELYSRGWFYHKLHHLWL
IRVPNMEPLVKTATYERGSYHCFDPTTFETVRKDNLVLHYEMVEKRPLISQH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggttacttaattcttctctgaatggatctgcttcgaaccatccagatggtgct
gggaggtcttttgctacaacgttctctggtcagtctggtgcagcctcctctgcttttcat
cacagtggagctaaccaaggattgcacattattcatgggagcttcaatgttcccaatatg
tccagtacactcacatcaagaaactcaataataaataacattccacccgggggcgttcag
caacccaccggtaacctttctagtggaagatttgcatccaacaacctccctgctgcactg
tcacagctatctcactctggagtcacaaatagagggggtataagtgtaggaaaccctgga
tttggtagtagcacaaatggagttggcggttctattcctgggactcttccaacatctgct
gcaattggtaaccggaatgctgttccaggattgggagtatcccaatttctaggaaatgca
ggccctcaaatcacaagttctgttggaaatatggtaggaggtaatattggaagaaatggt
ggggggttgtccatgcctggctttgcttctcgtctaaacttgagtacaaacagtggatct
ggtggccttggtgttcagggacagagccgtttaatgagtggtgtgctcccacatggatct
ccgcaggtaatttcaatgctaggaaattcttaccctagtgctggaggcccgctttcccaa
agccatgttgaagcaggaagtaacttgaactctatggggatgttgaatgatatgaatacc
aatgacagttcaccttttgacatcaatgactttcctcaactgacaagtcggcctagttcc
gctggaggacatcaagggcagttgggttctttaagaaaacagggtattggtattggtcct
attgttcaacaaaaccaagagtttagtattcaaaatgaagacttcccagccttacctgga
ttcaaaggtggtaatgcagattatgcgatggatatgcaccagaaagagcaacttcatgat
aatgctgtgccaatgatgcaatcgcagcatttctctatggggaggtctgctgattttagt
tcggggggaacatattcatctcatcgtgctcaacagcagcagcatgcttcttcagtgagt
agtgggagtgtccctttttcacctgtgaacaagcaggatcttctccatctacatgggtca
gatatttttccatcttcacactcaaactatcaatcacagagtggacctccaggcattgga
ttaaggcctccaagttctgcaaatgcaatttctggtatgggttcatacgaccagttcatt
cagcaatatcaacagcaccagaaccagccccagttccgccttcaaatgtcaactgtaaat
cagtcttttcgggatcagggaatgaagtctacacaaactacacaatctacaccagatcca
tttggtttgcttggtttgttaagtgtgatcaggatgagtgatcctgacttgacatctctt
gctcttggagttgatcttactatacttgggttaaatttgaactcaaccgaaaatcttcac
aagacttttgggtctccttggtttgacgaacaagctaagggtgatccggagattaatgta
ccacaatgttactatgctaaacaaccacctgatctacatcaaggttactttttgaaattt
tcgttggaaacattgttttacatattttacagcatgcccaaagatgaagcacaactttat
gctgcatatgagctttacagcagaggttggttttatcacaagctgcatcatctatggctt
ataagagttcccaacatggagccacttgttaaaacagccacatacgagagaggatcatat
cactgctttgatccaaccacatttgaaacagtccgcaaggataatcttgttcttcattat
gaaatggttgaaaagagaccacttatttctcaacattga
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