Lupinus angustifolius (narrow-leaved blue lupine): 109352356
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Entry
109352356 CDS
T04664
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109352356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109352356
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109352356
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109352356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109352356
NCBI-ProteinID:
XP_019449855
UniProt:
A0A4P1RD81
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All DBs
Position
LG07:2634036..2635255
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AA seq
314 aa
AA seq
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MEEPNSKPVLIREVWANNLESEFSLIRQLIGQYPFVSMDTEFPGVIFSQHVLTKTYQHQN
LHPLDEYRLLKANVDELNLIQVGLTLSDARGKLPDLGTNNCFIWQFNFCDFDVVRDKHAP
DSIALLRRQGIDFERNVVDGVDSARFAAMMLSSGLLYNKAVTWVTFHSAHDFGYLVKILT
QRKLPTRLDEFLWTVRRIFGNKVYDIKHMIRYCDSLYGGLNRVAETLKVYRVVGKCHQAG
SDSLLTWYVFQKIRDTYFVKGGHKKCSRVLFGLELYAFHQKVVNRGGKNRFYPQMNFNYN
ILNPQIITLRKALF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaagagccaaattcaaaacctgtcttgatcagagaagtgtgggctaacaatcttgaa
tctgaattcagtctcatccgtcaactcatcggtcaatatccgtttgtatccatggatact
gagtttcctggtgttatttttagccaacatgttctcacaaaaacttatcaacaccagaac
ctgcatcccttggatgaataccgccttctaaaagcgaacgttgacgaactcaacctcatc
caagttggcctcactctttctgacgcacgtggcaaactccctgaccttggaaccaacaac
tgctttatctggcaattcaacttctgcgacttcgatgtggtgcgtgacaaacacgctcct
gattcaattgctctcctccgtagacaaggtattgatttcgagcgcaatgttgtggacggt
gttgactctgcacgctttgctgcaatgatgctttcttctgggctcctctacaataaggct
gtgacttgggtcacgttccacagtgcccatgattttgggtatctggtgaaaattttgaca
caaaggaagttaccgactaggttggatgagttcttatggacagtgagacggatatttggg
aacaaggtttatgatattaaacatatgatccgttattgtgactcactttatggtggtttg
aatcgagtggctgaaaccctcaaagtgtatcgggtcgtcggaaaatgtcatcaagccggt
tcagacagtttattgacttggtatgtatttcagaagattagagacacatattttgtgaag
ggtgggcataaaaaatgttcgagagtgttgttcgggttagagttatatgcatttcatcaa
aaggtggttaatcgtggtggaaaaaatagattttacccacaaatgaactttaactacaat
atcttgaatcctcagattatcactttaaggaaagctttattctaa
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