Lupinus angustifolius (narrow-leaved blue lupine): 109352396
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Entry
109352396 CDS
T04664
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lang03036
]
109352396
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109352396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
109352396
NCBI-ProteinID:
XP_019449917
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All DBs
Position
LG07:complement(13049212..13072848)
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AA seq
1277 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDTMDGVVYTSSQFGLDERFGDGDASQIGLDLDEVL
LTDKAATMEHDDLSASPQFSYQEDEMKDEVSLTLDRMQVKALEARLIDDLPVAADAGECA
QGPSTPGLEEPDLFGTQVDQVNNEIDDHNSADLVSVKSMQEVSPSQQRDGDAIDCSLQNN
VQPVGVDLHHEGDDSLPIELDRKREQKEHLACMVVTTDQDSLIPNDHCSTSSPLTISSNI
ECPTALIPECAGGMISASGIPEMMEDFNGLVLMNNKQPHSDQTITNCVVTGGVNVNETAV
SLSCSHVTSDQENISCKHLLNMDGSRGPESDAPMKDDHTSPKHEVLNAIEMSHNEGLSCP
IDEAQVSNVISPRGSVGEPQVVDEEVQVSQELIETESSNHISHEVAHPTESHLRPCTSQL
SHPSLSSVEDPAIGHHETIEPFVCEGNPELGTSDVQIESHIFCDKVEIISKSAASDMPEP
EKMLSLGYQHDGETNNNLPMESTPNNQVVSDDHTDPAGIKCISSKKRSFTESTLTMQSVD
FVESYGGTQSKRTRESIPDDDDLLSSILDGRRSSVLKLKPSPVAPEIVSTKRSRSAPHTS
ALKRKVLMDDMMVLHGDTIRQQLTDTEDIRRIRKKAPCTRHEIFMIQRQSAEDEIFHEPI
FTCLSADLTILRNGSFDLTGIKVCDNGLDTSFLEKTNDKESHSRTNTETHGVETNIETKA
LQLQGDAEAQPTGIPVLSESHQSEANLESHDLDVHGHANIVSHVGELDNSQNVEMNNAGR
NIDVSVAKKNSVGAGLESSSLTVSENNHSLPNDCVASLPLMGKMNILVGSMHTDIPSMPT
DQNLNTSSILEDEFVEEKCNRSGVDAIEITEHSVEIRTKVQTDGLETNNLCASMVTGFKE
TDEYNDNRASFNGDLPLEENGSSMPGGLNENQIVASDLGSMGCDDKESRSGPIFSENTKV
DCLDTVAPVLDEKETSLNEGNPVCEEAGQHSVALVLDEKEAILNEGNPVCEEAGLESTLL
FPEIPAIESPFVDRNDENLIHANAYDTGFLNVGDDEIIEDDDFMPSAEESSLENSGWSSR
TRAVAKYLQILFEKEDLHGRQNLCLDNILAGKTRKEASRMFFETLVLKTKDYVHVEQTNP
FSSINIKPRMKLMKSDF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgttttactctcagtttatattggccaaaaaagggccgcttgggacaatatggatagct
gcacatttagagaggaagctcaggaagaatcaggtggctgataccgatatcggcgtctct
gttgattccattctttttcctgacgtaccaattgcactccgtttgtccagtcatcttctg
cttggtgtggtgaggatttattctagaaaggtgaattacctttttgatgactgcagtgag
gctttgcttaaggtaaagcaggcttttcgctccactgcagttgatttgccacctgaagaa
tctactgctccttaccattccatcaccttaccagagacttttgatcttgatgattttgaa
ctaccagataatgagatatttcaaggtaactatgttgatcaccacgtcagtaccagggag
cagattacactgcaagatactatggacggtgtggtttacactagctcacagtttggattg
gacgagcgctttggtgatggtgacgcatctcaaataggtttagacctcgatgaggtcctg
ttaacggacaaagctgctactatggagcatgatgacttaagtgccagtcctcaattctct
tatcaagaagatgaaatgaaagatgaggtaagtttaacattggatagaatgcaagtgaag
gcattggaagcaagattgattgatgatcttcctgttgctgctgatgctggtgaatgtgct
caaggtccatctactcctggactagaagagccagacttgtttggtactcaggtagatcag
gtcaataatgaaattgatgatcataattcagcagatttggtatcagtgaagagcatgcaa
gaagtttccccttctcaacaaagggatggagatgcgattgattgctctttgcagaataat
gtacagcctgttggtgtggatttacatcatgagggtgatgacagccttccaattgaattg
gatagaaaaagagagcaaaaggagcatttggcatgtatggtagtgacaacagatcaagat
agtctgatacctaatgatcattgttcaacatcatcacctttgacaatctcctccaatata
gagtgcccaaccgccctaataccagaatgtgcaggtgggatgatcagtgcgtctggtata
cctgagatgatggaagacttcaacggcttagttttgatgaacaataaacaacctcattcg
gaccaaactattacaaattgtgttgttactggaggagttaacgtgaatgagactgctgta
tctcttagttgttcccatgttacatctgatcaagagaacatctcttgtaaacatttgtta
aacatggatggatctcgagggccagaatcagatgctcctatgaaggatgatcacacatca
ccaaagcatgaagttctgaatgccatagaaatgtctcataatgaggggctatcctgtcca
attgatgaggctcaagtatctaatgttattagtcctcgaggatcagttggtgaacctcaa
gttgttgatgaggaagttcaggtctctcaagaactgatagaaacagagtcttcaaaccat
atttctcatgaagttgcgcatcccaccgagtcacaccttcgaccatgcacctcccagctg
agccatccttctttgtcatctgttgaagatcctgctataggtcatcacgagaccatagag
ccatttgtttgtgaaggaaacccagagttggggacatcagatgttcaaattgagagtcat
atattttgtgataaagtggaaattataagcaaatctgctgcttctgatatgccagagcct
gaaaaaatgctttccctaggatatcaacatgatggtgaaacaaataataatctgccaatg
gagtctactcctaacaatcaggttgtatctgatgatcatacagatcctgcaggaataaaa
tgcatatcaagtaaaaagcgcagtttcacagaaagtactcttacaatgcagagtgtggat
ttcgttgaatcatatggtgggactcaatccaagagaaccagagagtccattcctgatgat
gatgatctattgtcttccatattagatggtagaagatcttcagttttaaaattgaagccc
agtccggtagcccctgaaatagtatcaacgaaacgctctcgttctgcaccacacacttct
gccctaaagaggaaggtgctcatggatgatatgatggtcttgcatggcgatacaatacgc
caacagctgacagatactgaagatatacgtcgcatacggaaaaaagctccttgcactcgc
catgaaatttttatgattcaaagacaatctgcggaggatgagatttttcatgaaccaata
tttacatgtctgtctgctgatttgactattctgcgaaatggttcatttgatctgactgga
atcaaggtttgtgataatggtttagatacttctttcttggaaaaaacaaatgacaaggag
tcccattctagaacaaatactgaaactcatggagtggaaacgaatattgaaactaaggca
ctccaactccaaggagatgcagaagctcaacctactgggatacctgttttgtccgagtcc
catcagtcagaagctaacttggaatctcatgatcttgatgttcatgggcatgcaaatatt
gtttctcatgtgggagagcttgacaattctcaaaatgttgaaatgaacaatgctggcaga
aatattgatgtttctgttgcaaaaaaaaattctgttggcgctgggcttgaatcttcatcc
ctaacagtgtctgaaaataaccattctctgccaaatgattgtgttgcatccttgcctctc
atgggtaaaatgaacattctcgttggttctatgcatacagatataccaagcatgccaact
gaccagaatttgaatacatcatctattctagaggatgagtttgtggaggagaaatgtaat
agaagtggagtagatgctattgaaataactgagcacagtgtggaaattagaacaaaagtt
caaacagatggtttggaaactaacaatttatgtgcatccatggttacgggctttaaggaa
actgatgaatataatgataacagggcttccttcaatggagacctgcctttagaggaaaat
ggaagcagcatgccggggggcttaaatgagaatcaaattgttgcttctgacttggggtca
atggggtgtgatgacaaggaatcaaggtctggccccatatttagtgagaacactaaagta
gattgtttagacactgtagcacctgttttggatgaaaaggaaacttctctgaatgaagga
aatccagtttgtgaggaagcaggacaacattctgtagctctggttttggatgaaaaggag
gctattctgaatgaaggaaatccagtctgtgaggaagctggactagaaagtacattattg
ttccctgaaatccctgctatcgagagtccttttgtagaccgtaatgatgaaaatctcata
catgctaatgcttacgacacagggtttttgaatgttggtgatgatgagattattgaagat
gatgattttatgccatctgctgaagaatctagccttgaaaatagtggatggtcttcccgg
accagggctgttgccaagtatctgcagattttgtttgagaaggaagatctacatggaagg
cagaacctgtgccttgacaatattttagctggtaaaacacgtaaggaagcatcaaggatg
ttttttgaaacactggttctcaagacaaaggattatgttcatgttgaacaaacaaacccc
ttttccagtattaacataaaaccgcgaatgaagctgatgaagtcagatttctga
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