Lupinus angustifolius (narrow-leaved blue lupine): 109353802
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Entry
109353802 CDS
T04664
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109353802
09122 Translation
03013 Nucleocytoplasmic transport
109353802
03015 mRNA surveillance pathway
109353802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109353802
03041 Spliceosome [BR:
lang03041
]
109353802
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109353802
TREX complex
109353802
Spliceosome [BR:
lang03041
]
Complex C
Other components
EJC/TREX
109353802
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109353802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
RRM_3
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
109353802
NCBI-ProteinID:
XP_019451709
LinkDB
All DBs
Position
LG08:complement(1552256..1554723)
Genome browser
AA seq
229 aa
AA seq
DB search
MGFDGNGADAEIDNESVLYISNLHSEVTNYDIKLLFSEEGDLKRYCIHYDKNGKSKGTAE
VVFARRSDALAAIKKYNNMKLDGKTLQIELVGTCSVTPPVMPPFQSSLLGPIPNDGRVRL
SSFTGSVTPDVMPPFQSSLLGPIPNDGRRRFHNGFAHGRLSRGPGEGKALTRKVSARDLD
EDLERYRRLSKGSGQVKGHAGKVSARDLDDDLERYHSQAMQIKNKENEK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgatggaaatggtgctgatgctgagattgataatgaatccgtactttacata
tccaacttgcattctgaggttacgaactatgatattaagttgctcttctctgaagagggt
gacttgaaaagatactgcatccattatgacaagaatgggaaatcaaaagggacggcagaa
gttgtcttcgcgaggcgttctgatgctttagcagccataaagaaatacaacaatatgaag
cttgatgggaaaacattgcaaattgagcttgttggaacatgctcagttactcctcctgtt
atgcctccttttcaaagtagcttattgggaccaataccaaatgatggccgtgtaaggtta
tcttcatttacgggttcggtaactcctgatgttatgcccccttttcaaagtagcttacta
ggaccaataccaaatgatggccgtagaaggttccacaatggctttgcacatggccgtctt
tcaagggggcctggagaagggaaagctcttaccagaaaggtatccgctagagatctcgat
gaagacttggagagatatcggcgcctttcaaagggcagtggacaagtgaagggtcatgcc
ggaaaggtatctgctagagatcttgacgatgacttggaaaggtatcactcacaagctatg
cagataaaaaacaaagaaaatgaaaagtga
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integrated database retrieval system
