Lupinus angustifolius (narrow-leaved blue lupine): 109353828
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Entry
109353828 CDS
T04664
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03030
DNA replication
lang03420
Nucleotide excision repair
lang03430
Mismatch repair
lang03440
Homologous recombination
lang03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109353828
03420 Nucleotide excision repair
109353828
03430 Mismatch repair
109353828
03440 Homologous recombination
109353828
03460 Fanconi anemia pathway
109353828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lang03000
]
109353828
03032 DNA replication proteins [BR:
lang03032
]
109353828
03400 DNA repair and recombination proteins [BR:
lang03400
]
109353828
Transcription factors [BR:
lang03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109353828
DNA replication proteins [BR:
lang03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109353828
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109353828
MMR (mismatch excision repair)
109353828
DSBR (double strand breaks repair)
HR (homologous recombination)
109353828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
109353828
NCBI-ProteinID:
XP_019451738
UniProt:
A0A4P1RUS5
LinkDB
All DBs
Position
LG01:20806516..20809722
Genome browser
AA seq
608 aa
AA seq
DB search
MAQSITPNAISALLANPSPDSSSDLPHIVVQVLDLKPSGNRFMFNASDGKLKLRAILPFN
QSPEVHSGNIQNLGLIRIVDYTLNDIPNKSEKYLIVTKCEPVSPALEAEIKSEVNTVSDS
SSVGIVLKPKQEVTAKSAAQIVQEQHHNVTRTERKAVSRRVNPLVSLNPYQGNWTIKVSV
TSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFYDKFVLGKVYYISKGSL
KVANKQFKTVQNDYEMTLNDYSEVEEVADEAAFVPATKFNFVQIDQLGPHVNKNDLVDVV
GVVQNVSSTMSIRRKSNNETVPKRDITIADDTKKTVVVSLWNELATTIGQELLEIADQSP
VVAIKSLKVGDFQGVSLSAINKSVVLINPDLPEANKLRCWYDSEGKEAAMASVGAGSSPA
SKNGNRSVYSDRVSLSHITSNPSLGEDKPAFFSIRGYISFIKPEQAMWYRACKTCNKKVT
ESIGAGYWCEGCQKNDDQCNLRYIMVVKVSDASGESFISVFNEEAEKIVGCSADELDNLK
SQDGEDSPYQMKLKQATWVPHLFRVSVTQNEYNNEKRQRITARAIVPVDFATESKLLLED
ISKMGVSQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcaattaccccaaatgctatttcagctttacttgctaacccttctccagat
tcttcttcagatctaccacatatcgttgtccaagtcctcgatctcaaacctagcggcaac
agattcatgttcaatgctagtgatggaaaattgaagctgagggcgattcttcctttcaat
caaagccctgaggtacactctgggaatattcagaatctgggtcttattcgaatcgtcgat
tacactctcaacgatatccctaacaaatctgagaaatatcttattgtaacgaaatgtgaa
cctgtttcacctgcgcttgaagcggagataaagagtgaggttaacactgtaagcgattct
tcttctgttggcattgttttgaagccaaagcaggaagtgacggcaaaatctgcggctcag
attgtgcaagaacaacatcataatgtgactcgtactgaacggaaggcggtgtcacggagg
gtgaatcctcttgtatcattgaatccataccaaggtaattggacaatcaaggttagtgtt
acaagcaaagggaacatgcgtacttataagaatgctagaggagaaggttgtgtcttcaat
gtggagttgactgatgaagatggcactcagattcaagcaaccatgtttaatgaggctgca
aagaaattttatgacaagtttgttttgggaaaagtttattacatttcaaagggatcttta
aaagttgctaataaacagtttaaaactgttcaaaatgattatgaaatgacactgaatgat
tattctgaggtagaagaggtggccgatgaagcagcttttgtccctgcaacaaaatttaac
ttcgttcaaattgatcagttgggtcctcatgtcaacaagaatgaccttgttgatgtagtt
ggagttgttcagaatgtgtcttcaaccatgagcattaggaggaagagcaacaatgagaca
gttccaaagcgcgacattacaattgctgatgatactaagaagacagtagttgtatcattg
tggaatgagcttgcaactaccatagggcaagagttgcttgaaattgctgatcaatctcca
gtagttgctatcaagtccctcaaggttggggatttccaaggtgtttctctgtcagctata
aacaaaagtgtggttctaataaatccagacttacctgaagcaaataaactcagatgctgg
tatgattctgaaggcaaggaagctgcaatggcctctgtgggtgctgggtcaagtccagca
agcaagaatggaaacagatcagtgtactctgatcgtgtttcactttctcacataacttca
aacccatccttgggggaagacaagcctgcattcttcagtattagaggatatataagcttt
atcaagcctgagcaggcaatgtggtaccgtgcatgtaaaacttgcaacaagaaagttact
gaaagcattggtgctgggtattggtgtgaaggttgccagaaaaatgatgaccagtgcaat
ttaaggtatattatggttgtaaaagtttctgatgcaagtggggagtcttttatctcagtc
ttcaatgaagaagctgagaagattgttggatgttctgctgatgagcttgacaaccttaaa
tcacaggatggggaagatagtccttatcaaatgaaattgaaacaagctacttgggttcca
catcttttcagggttagtgttactcagaatgagtataataatgagaagaggcaaagaatt
acagctcgtgcaattgttcctgttgactttgctactgagtcaaagcttctgcttgaagat
atttcaaagatgggagtttctcaataa
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