Lupinus angustifolius (narrow-leaved blue lupine): 109354109
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Entry
109354109 CDS
T04664
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109354109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lang03400
]
109354109
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109354109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ATG17_like
Motif
Other DBs
NCBI-GeneID:
109354109
NCBI-ProteinID:
XP_019452011
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Position
LG01:21049342..21057809
Genome browser
AA seq
942 aa
AA seq
DB search
MAENFTQLHNNLPELKLDSRQAQGFLSFFKTLPKDPRAIRFFDRRDYYTAHGENAIFVAK
TYYHTTTALRQLGSGSDALSSISVSKNMFETIARDLLLERTDHTLELYEGSSSNWKLVKS
GTPGNIGSFEDILFANSEMQDSPAVVALSLNFGENGCTVGLGFVDLTKRVLAMAEFLDDS
HFTNVESAMVALGCKECILPIECGKPAENRMLHDTMTRCGVMLTERKKSEFKTRDLVQDL
GRLVKGSIEPVRDLVAGFEFAPGALGALLLYTELLADEGNYGNYTLRRYNLDSYMRLDSA
AMRALNVLESKTDANKNFSLFGLMNKTCTAGMGKRLLHMWLKQPLVDVKEINSRLDVVQA
FVEDTLLRQDLQQHLKRISDIERLVHNLQKGKAGLHHIVKLYQSSIRVPYIKSALENYDG
QFSSMMRSRYFEPLELWTDDDHLNKFIGLVEVSVDLDQLENGEYMISSSYDPRLSKLQEE
LELLESQIHDLHRQTADNLDLPIDKALKLDKGTQFGYVFRITKKEEPKIRKKLSAQFLVL
ETRKDGVKFTNTKLKKLGDQYQQIVEEYKSCQKELVNKVVQTAATFSEVFESLAELIAEL
DVLLSFAVLASSCPTPYTRPVITSSDEGDIILEGSRHPCVEAQDWVNFIQNDCKLIRGKS
WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGV
STFMQEMLETTSILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVKLIKAPTLFAT
HFHELTALGLGNVGHDQHKQVVAVVNYHVSAEIDASTRKLTMLYKVEPGACDQSFGIHVA
EFANFPENVVALAREKAVELEDFSPAIYLTDTTKEVGSKRKRVAFEADEVPQGPARAKQI
FEEFLALPVDRNDKRQTLEQVRKFKDNLDKDAENCHWLQRFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacttcactcaactccacaataaccttcctgagcttaaattagattctcgg
caagcacaaggttttttatcgtttttcaaaaccctacctaaggatccgagggcaattcga
ttttttgatcgccgggattactatactgctcatggtgagaatgcaattttcgttgctaag
acctactaccacactactactgctttgcgacaactgggtagtggatcagatgctctttct
agtatcagtgtcagtaagaacatgtttgaaacaattgcccgtgatctacttttggagaga
acagaccatactcttgagctctatgaaggaagtagttctaattggaaactggtcaaaagt
ggaacacctggtaatattggcagttttgaagatattctttttgctaactctgaaatgcaa
gattctccggctgttgttgcactgtcacttaacttcggtgaaaatgggtgcactgttggg
ttaggatttgttgatctaactaagagagtacttgcgatggctgaattccttgatgatagt
cacttcacaaatgtggagtcagcaatggttgctcttggctgcaaagagtgcattctgcct
attgagtgtggcaaacctgctgaaaatagaatgttgcacgacacaatgactagatgtggt
gtgatgttaactgagaggaagaaatccgagttcaaaaccagggatctagtacaggatctt
ggcaggcttgttaaaggctctattgaaccagtacgcgatttagtggctggatttgaattt
gcacccggtgctttgggggcattattattgtatacagagttgcttgcagatgaagggaat
tatggaaattatacacttcgtaggtacaatcttgacagttacatgaggttagactctgca
gccatgagggctcttaatgttctggaaagcaaaactgatgcaaacaaaaatttcagtttg
tttggtctcatgaataaaacctgtacagctggaatgggaaaacggttattgcacatgtgg
ctaaaacagcccttagtagatgtaaaagaaattaattccaggctggatgtagtccaagca
tttgtggaggacactctgcttcgccaagatctgcaacagcatctaaaaagaatatcagac
attgagcgattggtgcacaatcttcaaaagggaaaagctggtctgcatcatattgttaaa
ctttaccagtcaagcataagagtaccttacattaaaagtgctctagaaaactatgatgga
cagttttcatcaatgatgaggagcaggtattttgaacctcttgagttatggactgatgat
gatcacctaaacaaattcattggacttgtggaagtttcggttgatcttgatcaactggag
aatggggaatacatgatttcttcaagttatgaccctagactatctaaacttcaggaggag
ctggagttactagagagccaaatacatgacttacatagacaaactgctgataatcttgat
ctgcctatagacaaggcattgaaattagacaagggtactcaatttggatatgttttcaga
atcacaaagaaggaagagccaaaaataaggaaaaagctcagtgcccagttccttgtactg
gaaacccgtaaagatggagtaaaatttaccaacacgaagctcaagaaactgggagaccag
tatcaacagatagttgaggagtacaagagttgtcaaaaagagttggttaataaagtagtt
caaactgcagcaacattctctgaggtttttgagtctttagctgaattaatagctgaattg
gatgtgttactaagctttgctgttttggcttctagctgtcctactccctacactaggcct
gtcatcacttcatcggatgaaggagatattatcttagaaggcagcagacacccttgtgtg
gaggcacaagactgggtgaattttatacagaatgattgtaagcttatcagaggaaaaagt
tggtttcaaataattacagggcctaacatgggtgggaagtcgacattcatccgacaggta
ggtgttaatattttgatggcacaagttggttcctttgttccttgtgacaaagccagcata
tctgttcgtgattgcatttttgcccgtgttggtgctggtgactgccaacttcgtggagtt
tctaccttcatgcaagaaatgcttgaaacaacatctatattaaaaggagccacagacaag
tccttgataatcattgatgaattgggacgtgggacatcaacttatgatggatttggtcta
gcttgggccatatgtgagcacattgttaaattgatcaaagcacctactttgtttgctacc
cactttcacgaactgactgcattaggccttgggaacgtaggacatgatcaacataagcaa
gttgtggctgtggtgaactatcatgttagtgcagagattgatgcatcgactcgtaagcta
actatgctatacaaggttgaaccaggagcttgtgatcaaagttttggtattcatgtggct
gaatttgcaaacttccctgaaaatgttgttgccctagctagagaaaaggctgtggaattg
gaagatttttctcctgcaatatacttaactgatactacaaaggaggtaggttctaaacgt
aagagagtagcatttgaagctgatgaagtacctcaagggcctgcaagggctaagcaaata
tttgaagaatttcttgctttgccagtagatagaaatgataaaaggcaaactttggaacaa
gtaaggaagttcaaggataacttagataaggatgcagaaaactgtcattggctgcaacgg
ttcttctaa
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