Lupinus angustifolius (narrow-leaved blue lupine): 109354316
Help
Entry
109354316 CDS
T04664
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109354316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109354316
Spliceosome [BR:
lang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109354316
Complex C
U4/U6.U5 tri-SnRNP related factors
109354316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
ZapG-like
Motif
Other DBs
NCBI-GeneID:
109354316
NCBI-ProteinID:
XP_019452266
UniProt:
A0A4P1RBD6
LinkDB
All DBs
Position
LG08:5416539..5420856
Genome browser
AA seq
384 aa
AA seq
DB search
MANRTDPSAKSIRGTNPQNLIEKILRSKIYQSTYWKEQCFGLTAETLVDKAMEVEHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDIYRYL
EPLYNDYRKLRQKLADGQFALTHVDEVIDELLTKDYSCDIAMPRIKKRWTIESLGALEPR
RSALEEDFEEEEEKEDNDQPADELEDRTHEKDYYRGRSPTRERDRDRRRDSHRHRDRDYD
RDYDRDYDRERGRGRDRDRDREKERDRDRYRIRDDKDYGRDREGRERERRDRDRDRGRRR
SYSRSRSRSRDRKEHDGGDYKKRRARGSISPRRHGDGAEDGEPKKKKEKREKKEKKDDGT
DHPDPEIAEANKLRASLGLKPLKV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggatccatcagcgaagagcataagagggacgaaccctcagaacctt
attgagaaaattctccgatccaaaatctatcagagtacctattggaaggaacaatgtttc
ggcttaacggcggaaaccttggtcgacaaagccatggaggtcgaacacctcggcggaacc
tacggtggtaaccgcaaacccacaccgttcatgtgccttgtcatgaagatgctccagatt
caacctgagaaggaaatcgtcatcgagttcattaaaaatgaggattacaaatatgtgagg
atacttggtgctttttatctgcgtcttactggttcagatattgatatataccgctacctt
gagcccttgtataatgattatcggaaactgcggcaaaagttagctgatggacagtttgca
ttgacacatgtggatgaggttattgatgaacttctcactaaagattattcctgcgatatt
gctatgccccgcatcaagaaaaggtggactattgaatctctcggtgcactagagcctaga
cgaagtgcacttgaagaagattttgaggaggaagaagaaaaagaagataatgaccaacct
gctgatgagcttgaagataggacccacgagaaggattactatcgtgggcgaagccctaca
agggaaagagatagggacagaagacgtgatagtcatagacatagggatcgtgactatgac
agagattatgatagagattacgacagagagcgtggacgtggccgggacagagacagagac
agggaaaaggagagggacagagaccgatatcgtatcagggatgataaagattatggtcgt
gatagagagggtagggagcgagagaggagagatagagatcgtgatcgtggaagacgaagg
agctactcaaggagtcgaagtaggagtagggatcgcaaggaacatgatggtggagactac
aaaaagagacgtgcccggggcagcataagtcctagaaggcatggggatggagctgaggat
ggcgagccaaagaaaaagaaggagaagagagaaaagaaggaaaagaaggatgatgggact
gaccaccctgatccagagattgcagaagcaaacaagctacgggcatcccttggtttgaaa
ccactgaaggtctga
DBGET
integrated database retrieval system
