Lupinus angustifolius (narrow-leaved blue lupine): 109354620
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Entry
109354620 CDS
T04664
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109354620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109354620
Spliceosome [BR:
lang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109354620
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
PRP4
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD_LRWD1
WD40_RFWD3
eIF2A
Ge1_WD40
Beta-prop_WDR75_2nd
Nbas_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
109354620
NCBI-ProteinID:
XP_019452782
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Position
LG08:9912450..9916331
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AA seq
560 aa
AA seq
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MEVEENTTSTTASESSIPASGAQTILPLHPLQPIIPPLIVPPIAPIPVVHTHASLPVRPP
VIRPPPPVLHNGEAGSSDSDDSDNDDSVHGINKGMGDYEISEESRLVRERQEKAMQELLL
KRRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIMAKLDAEGQLEKLLKA
HEDEEAAASALKDEVEGEELQYPFYTEGSKSLLNARIDIAKYSLVRAALRLQRARRRRDD
PDEDMDSEMDWALKQAANLSLDFSEIGDDRPLFGCSFSPDGKALATCSLTGAAKLWSMPK
LTKISTLKGHTERATDVAYSPVHNHIATASADRTARYWNDQGALLKTFEGHLDRLARIAF
HPSGKYLGTASYDKTWRLWDIETGEELLLQEGHSRSVYGLAFHHDGSLAASCGLDALARV
WDLRTGRSVLALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNL
ISQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSVDVHGDGSIATVSH
DRTIKLWSSNVTSEQAMDVD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaggaaaataccacctcaactactgcttctgaatcttctataccagcctct
ggtgctcaaacaattctgccgcttcacccattacaacctattattccaccacttattgtg
cctcctatagctccaattcctgttgtccacacacatgcatcacttccagttcggccaccg
gtaattaggccacctccacccgtgttgcataatggcgaggctggatcaagtgactctgat
gattcagataacgatgattcagttcacgggatcaacaagggtatgggggattacgagata
tcggaggagagtagactggtaagagagcgtcaggagaaagcaatgcaggagctccttttg
aagaggcgtgctgctgctcttgctgttcccaccaatgacatggctgtgcgaactcgtctt
cgccgccttggtgaacctataactctctttggtgaaagggagatggaaagacgagacagg
ttgcgaatgattatggctaaactcgatgctgaaggtcagttggaaaagttgttgaaggct
catgaagatgaagaggctgctgcttctgctctgaaagatgaggttgagggggaggaacta
cagtatcccttttacactgaaggctcaaagtctctcctgaatgctagaattgatattgct
aaatattctttagttagggcagcattacgtcttcagcgtgcacgaagaagaagagatgat
ccggatgaagatatggattcagagatggactgggcactgaagcaggctgcaaatttgagt
cttgatttcagcgaaattggagatgatcgaccactttttggttgttccttctcccctgat
ggaaaagcacttgctacatgttctttaactggagctgccaagttgtggagcatgcctaaa
ctcacaaaaatttctacactgaagggtcacacagagcgtgctactgatgttgcttattct
cctgtgcacaaccatatagcgactgcatcggctgatcggactgcaaggtattggaatgac
caaggagctctcttaaagacatttgagggtcatcttgaccgtcttgcacgaattgctttc
catccatctgggaagtacttgggcactgccagctatgacaagacatggagattatgggat
atcgaaacaggagaggagttgcttcttcaagaaggtcatagtcggagcgtatacggttta
gctttccaccatgatggatctttagctgcatcttgtggactggatgctcttgctcgtgtt
tgggacctccgaactgggagaagtgttcttgcattggaaggtcatgtcaagccggttctt
ggcatcagtttttcacctaatggatatcatttagccaccggtggcgaggacaacacttgt
cgcatttgggatttgaggaagaagaaatccttgtacaccattcctgcgcactctaattta
atatcacaagttaaatttgagccacaagagggttacttcttggtaactgcctcatatgac
atgacagcaaaggtttggtcagcccgtgactttaagcctgtgaagactctgtctgggcat
gaagcaaaagttacttctgtagatgttcatggagatggcagtattgctactgtctcccat
gatcgcaccataaagttgtggtccagcaatgtgactagtgaacaagctatggatgtcgat
tag
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integrated database retrieval system
