Lupinus angustifolius (narrow-leaved blue lupine): 109354669
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Entry
109354669 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109354669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109354669
03009 Ribosome biogenesis [BR:
lang03009
]
109354669
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109354669
Spliceosome [BR:
lang03041
]
Complex A
U1 snRNP components
U1 related factors
109354669
Complex B
109354669
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
Pre-60S particles
Helicases
109354669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
109354669
NCBI-ProteinID:
XP_019452867
UniProt:
A0A4P1RAX5
LinkDB
All DBs
Position
LG08:complement(10273766..10279590)
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AA seq
718 aa
AA seq
DB search
MAATATASVGPRYAPADPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSAAPPKSS
SVSSSVQVQQQSSLGMHRGRSPDLNDRYDRNGSRESNAEAGSRNHQSSKGGGFSSHNGMQ
DSGNGSSSIKDPVAFDAGPELSPEAYRRRHEITVSGDKVPPPIISFGSSGLPSEILKEVQ
SAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPSFMHIKRVSNNSRLGPTVL
VLSPTRELATQIQDEAVKFGKSSRFSCVCLYGGAPKGPQLRDIDRGADIVVATPGRLNDI
LEMRRISLQQVSYLVLDEADRMLDMGFEPQIRKIVNEVPAHRQTLMYTATWPKEVRKIAA
DFMVNPVQVNIGNVDELVANKSITQHVEVLSSMEKQRRLEAIIRTQDPGSKIIIFCSTKK
MCDQLARNLSRQYGATAIHGDKSQGERDHVLSQFRTGKTPVLVATDVAARGLDVKDIRVV
VNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKVLEGANQRVPPELRD
MSSRGGGMNRSRRWGSGGSGYGGRSNDTGYGGRGSDSSFGGRGSDSGYGGRGGDSNYGGR
GGWSASAGSGGGRGFDSDSQRNDRGRSPDKVSSWSDRFKNRDRSRSPDRNAPPQNSKISF
HQAMMERSGGDGDRSKSFISPSSPGFGRSTGDGRNGGSNSKYNGEEEEGMIRDEEGTI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagcaactgcttcagtgggtccacgttatgcaccagctgacccgacactt
cccaagccatggcggggtcttgtggatggtaagactgggtatctttacttttggaatcct
gaaaccaatgtcacccaatatgagaggccttcaagctcagctgccccaccaaagtcatcc
tcagtgtctagttctgtccaggttcaacaacaatcatctctaggtatgcatcgtggtcgc
agtccagatttgaatgataggtatgatagaaatggcagcagagagtctaatgctgaagct
ggatcacggaaccatcagagttccaaaggtggaggttttagttctcataatgggatgcaa
gattctggaaatggtagttcttctatcaaagatcctgtggcattcgatgctggacctgaa
ttatctcctgaggcttatcgccgtcgccatgaaataactgtttctggggataaagtgcct
ccacctattatatcatttggatcgagtggcttaccatctgagattctaaaagaggtacaa
agtgctggattctcagccccaactccaattcaggcacaatcatggcctattgctcttcaa
agtagagatatagtcgccattgctaagactggttcagggaaaactttggggtatttaatc
ccatcatttatgcacatcaagcgtgtttctaataattccagattaggccccactgtattg
gtactgtctccaacgagggagctggccacacaaatccaagatgaagctgtgaagtttggg
aaatcatcgagattttcttgtgtgtgtttgtatggaggggcaccaaagggtccacaattg
agagacattgatcgtggagcagatattgtggtagccactcctggtcggttgaatgatatt
cttgagatgaggagaattagtcttcaacaggtctcttaccttgtgctcgatgaggcagac
aggatgctggacatgggttttgagcctcagattaggaagattgtgaatgaggttcctgct
cataggcaaactctcatgtatactgcaacatggcctaaggaagttaggaaaattgcagct
gattttatggtcaatccagtccaggtcaacattggcaatgtagatgagcttgttgctaac
aaatccattactcagcatgttgaagtattgtcatcaatggagaaacagagacgactggaa
gctattatacggacccaggatccaggatcaaaaataattattttttgttctaccaagaaa
atgtgtgatcaacttgctcgtaatctctcacgtcagtatggagctactgctattcatggg
gataaatcccagggtgagagggaccatgtgttgagtcaatttcgaactgggaagacccct
gtgcttgtagccacagatgttgcagctcgaggactggatgttaaagatattagggtggtt
gtcaactatgacttccctacaggagtggaagattatgttcataggattggaaggacaggg
agggctggagccactggtttagcttacactttcttcggggaccaggatgctaaacatgct
tcagatctcatcaaagttttggaaggtgcaaatcagcgagtccctccagaactccgtgat
atgtcatcgcggggtggtgggatgaacagatccagaagatggggttctggtggctctgga
tatggtggaaggagcaatgacacaggatatggtgggagaggtagtgattcaagttttgga
ggtaggggtagtgattcaggatatggtgggagaggtggtgactcgaattatggagggaga
ggtgggtggtctgcttctgcaggcagtggtggaggccgtggttttgattctgactcacag
aggaatgatcgtggtcgaagccctgacaaggtatctagttggagtgatcgcttcaaaaac
cgtgatcgcagtcgtagtcctgacaggaatgcaccacctcagaattccaaaatcagcttt
caccaagcaatgatggaacgtagtggaggagatggtgatcgcagcaagagctttatctca
ccatcctctcccggttttggcagatccactggcgatggaagaaatggtggatctaattcc
aagtacaatggagaagaagaggaagggatgattcgtgatgaagaaggcacgatatag
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