Lupinus angustifolius (narrow-leaved blue lupine): 109355041
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Entry
109355041 CDS
T04664
Name
(RefSeq) flowering time control protein FY-like
KO
K15542
polyadenylation factor subunit 2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109355041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109355041
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109355041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
eIF2A
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_HPS5
WD40_like
Beta-prop_DCAF12
Tricorn_2nd
Pep3_Vps18
WD_LRWD1
PROPPIN
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
109355041
NCBI-ProteinID:
XP_019453491
UniProt:
A0A1J7H0Q6
LinkDB
All DBs
Position
LG08:complement(19709335..19720534)
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AA seq
710 aa
AA seq
DB search
MMYGDPHNHQHHPQQQQQPPQHFQHHQQPGPEFHRGPPPPPPQMMRQPSASSINIAPEFH
HPAPGGHPPPHYDAHGDSHGAKRIRKLAQRRAVDYTSTVVRYMQIRMCQRDSRDRTVLQP
TPGAAIDMLPAVGYSDNPSTSFAAKFVHTSVNKNRCPINRVLWTPTGRRLITGSQTGEFT
LWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKE
SVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEESSLTGHGWDVKSVDWHPTKSLLVSGG
KDNLVKLWDAKSGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIVKLYDIRAMKELES
FRGHRKDVTALAWHPFHEEYFVSGSHDGSIFHWLVGHETPQIEVTGAHDNNVCDLAWHPI
GYLLCSGSSDHTTKFWCRNRPGDTARDRFNNGMQGYGEQNLAAGRVAGNFAMPEVPTTPG
PFPPGLTRNEGTIPGVGVAMPLLDVPQGEQMQPHPASMGAPPLPPGPHPSLLTANQQRPY
QQNPQQIPQHQHQGPPQQMGPLPLPLNLPQLQNPSQSSMVPHPHLPRPPHQMPLGMPGPT
SHQMPMPGPMGMQGGMNQMGPPMPQGHYGGMNQMHSGSLPPSGGPPVGVFPGNLPNMQGP
PNTGYPQGAFNRPQGGQIPLMQGYNPYQSGNQSGMPPNAQPGAPHSQMPQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggtgatcctcataaccaccagcaccatccgcaacagcagcagcagccgcca
cagcattttcagcaccaccagcagccaggtccagaatttcaccgtggaccgccgccgccg
ccgccgcagatgatgcgccaaccgtctgcttcgtccattaacatagctccagagtttcac
caccccgctcccggtggccaccctcctcctcattacgatgctcacggtgatagccatggt
gcaaaaagaataagaaagcttgctcaaagaagggcggttgattatacgagcacagttgtg
cgttatatgcagattcgtatgtgccagcgtgattcaagggataggacagtactccaacca
accccaggagcagcaattgatatgttgccagcagttggctattcagacaatccatctaca
agctttgctgctaaatttgttcatacatctgtaaataaaaatcgctgccctattaatcgt
gttctttggactccaacaggacggcgtctaattactggctcacagactggggaattcact
ctttggaatggacaatcttttaatttcgaaatgattcttcaggcacatgaccaagcaatt
agatccatggtctggagtcacaatgacaactggatggtctctggtgatgacggaggcgca
ataaagtattggcagaacaacatgaataatgttaaagccaacaaatctgctcataaagaa
tcagtccgggacttgagtttctgtaggacagatttgaagttctgttcatgctctgatgat
accactgttaaagtttgggattttgcacgctgtcaagaagaatcttcattaactggccat
ggttgggatgtgaagagtgttgactggcatcctacaaaatcccttttagtatcaggtggg
aaggacaatcttgtgaaactttgggatgctaaatcgggcaaagaactttgctcatttcat
gggcataaaaatactgtgctatgtgtcaagtggaatcaaaatggcaactgggtgttaaca
gcttcaaaggatcaaatagtaaagctttatgacataagggctatgaaggagcttgaatca
ttccgcgggcatcgcaaggatgttactgctttggcttggcatccatttcatgaagagtac
tttgtcagtgggagtcatgatggttccatcttccattggctcgtgggacatgaaactccg
caaattgaagttactggtgctcatgataataatgtgtgcgaccttgcatggcatcctatt
gggtaccttctctgcagtggtagcagtgatcatacaacaaagttttggtgcagaaatagg
ccaggagacactgctcgtgatagatttaacaatggcatgcaaggatatggtgagcaaaat
ctggctgctggccgtgtggctggtaactttgcaatgcctgaagtcccaacaactcccgga
ccatttccccctgggttgactcgaaatgaaggcaccattccaggtgttggagttgcaatg
cccttacttgatgtgcctcagggggagcagatgcagccccatcctgcttcaatgggtgct
cctcctcttccaccaggtccacatccctctcttcttactgccaatcaacagagaccatac
cagcagaatcctcagcagatcccacaacaccaacaccagggaccaccacaacagatgggt
cctttgcctttgcccctaaatctgccccagctacaaaacccttcccagtcatccatggtc
cctcatccacatctgcctcgccctccacaccaaatgccacttggaatgccaggtcctacg
tcacatcagatgccaatgccaggtccaatggggatgcaaggtggaatgaatcagatgggt
cctccaatgccacaaggacattatgggggcatgaatcaaatgcattcaggatccttgcct
cctagtggagggccgccagttggagtttttccaggcaacttgcctaatatgcaagggcca
ccaaataccggttatcctcaaggagcattcaaccgacctcaaggtggacaaatccctctg
atgcaagggtataatccataccagtctggaaatcaatcagggatgcctccaaacgcacaa
ccaggggcaccacactctcaaatgcctcaatag
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integrated database retrieval system
