Lupinus angustifolius (narrow-leaved blue lupine): 109355622
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Entry
109355622 CDS
T04664
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lang03016
]
109355622
Enzymes [BR:
lang01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109355622
Transfer RNA biogenesis [BR:
lang03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109355622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
109355622
NCBI-ProteinID:
XP_019454410
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Position
LG08:complement(25474748..25479512)
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AA seq
624 aa
AA seq
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MKESMGTEMLLEDIEDLMIGGATGFRLPIASNTVAVAPSTKKRIQPQHSSIPGTQTIYIK
TFGCSHNQSDSEYMAGLLSAFGYSLSDNPDQSDLWLVNTCTVKSPSQSAMDTIISRAKSS
NKPLVVAGCVPQGSRNIKELQGISIVGVQQIDRVVEVVEETLKGHEVRLLTRTTLPALDL
PKVRKNTFVEILPINVGCLGACTYCKTKHARGHLGSYTVQSLVGRVKSVISDGVKEIWLS
SEDTGAYGRDLGVNLPTLLNALVAELPADASTMLRIGMTNPPFILEHLKEIAQILRHPCV
YSFLHVPVQSGSDTILSAMNREYTVSEFKTVVDTLTELVPGMQIATDIICGFPGETDEDF
EQTVNLVNEYQFPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFEAFTPYNGME
GRVERIWITDIASDGVHLVGHTKGYIQVLIIASDNMLGTSAMVKITSVGRWSVFGEVIEM
VSCSDHKVSCKQIPNQDVPSLCCNPAKNGGLSESPECCACGNDSCCGQSMLEKSGDSRSS
VVPQNQNNRSFVGWILRKRKHLLHRGTENDLDSASGSVLKHEGGHGSMTKWDFVDKALLG
GISISIFTIIALIVALKFSVFWSK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatcaatgggaacggaaatgttgttggaggacattgaagatttgatgattggc
ggcgccaccggtttccgcttgccaattgcgtctaacactgttgccgttgctccttcaact
aaaaagaggattcaaccacaacactcttcaattcctggcactcagactatttacatcaag
acctttggatgctcccataaccagagtgatagcgaatacatggctggtctcctttcagcc
tttggctattcattatctgataatcctgaccaatcagatctctggctcgtcaacacttgc
actgtcaaatcccctagtcagtctgcaatggataccatcatctccagagccaaatcttct
aataaaccactcgttgttgccggctgtgtccctcaaggaagtcgtaacatcaaagagctt
caaggtatcagcattgttggcgttcagcaaattgaccgcgttgttgaagtcgttgaggag
actttaaaagggcacgaggttcgtctcttgactcgtaccaccctcccagcacttgacctt
cctaaggtcaggaagaacacgtttgttgagattcttcctattaatgttggttgtttaggt
gcttgcacttattgcaagactaagcatgctcgtggtcacttaggcagttacactgtacaa
agccttgtagggcgtgtaaaatctgtcatatctgatggcgttaaagagatatggctcagc
agtgaagacactggagcatatggtcgtgaccttggtgtcaatcttccaactttattgaat
gctttagtagctgaactaccagctgatgctagcacaatgctccgtattggaatgaccaat
ccacccttcatccttgagcacctgaaagaaatagcacaaattttgcggcatccatgtgtg
tactcatttttgcatgtaccggttcagtctgggagtgatactattttgagtgctatgaat
cgagaatatactgtgagtgagttcaagactgttgtagataccttaactgaacttgtgcca
gggatgcagattgccactgacataatatgtggatttcctggtgaaacggatgaagatttt
gaacaaactgtcaaccttgttaatgagtaccagttcccacaagttcacatttcacaattt
tatccacgaccagggacacctgctgcaaggatgaaaaaggttccaagtaatgtggtgaag
agacgaagccgagaattgacaaatgtctttgaagccttcacgccatataatgggatggaa
ggcagagtggaaagaatttggattactgatattgcatctgatggagttcatttggttggt
catacgaagggatatatacaagttcttataattgcttcagacaatatgctgggaacgtca
gctatggttaagataacatctgtaggaaggtggtcagtttttggagaagtgattgagatg
gtcagctgtagtgaccataaagtttcatgcaagcagattcctaatcaggatgtgccttct
ctctgctgtaatccagccaagaatggtggactctcagaaagtccggaatgttgtgcttgt
ggaaatgacagctgctgtggtcagagtatgctggagaagagtggtgactcaagaagctct
gttgtgccgcagaatcaaaacaatagaagctttgttggatggatactgaggaagcggaag
catctgctgcatagagggacagagaatgaccttgactcagcctcaggatctgttttgaag
cacgaagggggccatgggagcatgacaaagtgggactttgttgataaagctcttctgggt
ggaatatctatcagcatcttcactattattgctttaatagtagctctgaagtttagtgtt
ttttggtccaagtaa
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