Lupinus angustifolius (narrow-leaved blue lupine): 109356486
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Entry
109356486 CDS
T04664
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03020
RNA polymerase
lang03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109356486
09124 Replication and repair
03420 Nucleotide excision repair
109356486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109356486
03400 DNA repair and recombination proteins [BR:
lang03400
]
109356486
Enzymes [BR:
lang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109356486
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109356486
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109356486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
109356486
NCBI-ProteinID:
XP_019455343
LinkDB
All DBs
Position
LG09:12060154..12072812
Genome browser
AA seq
1877 aa
AA seq
DB search
MDIRFPFSPAEVAKVRRVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI
DRKMKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLNIMRCVCFNCSKILADENDHK
FKQALRTRNPKNRLKKILDACKNKNKCEGGDEIDIAGGQDTEEAIKKSRGGCGAQQPRIS
IDGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLSVLKRISDEDCQLLGLDPKYA
RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGSPAHII
SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
SLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKAI
NLIRYSSWHNESERGSITPGDTMVRIEKGELLTGTLCKKTLGASSGSLIHVIWEEVGPDA
ARKFLGHTQWLVNYWLLQQAFSMGIGDTIADASTMEVINQTISQAKEKVKQLIRDAQEKK
LEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM
TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
EGLIDTAVKTSETGYIQRRLVKAMEDIMCKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQ
KLDSLKMKKTEFDRVFRHNFDDENWKPNYMLEESVEDLKSFKEFRSVFEAELHKLETDRF
QLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRTSDIHPMEIVDAIDKLQERLKVV
PGDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSQVAS
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVFL
KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDVDFVKSYYEMPDEE
VALDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
MNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMTLRGIPDINKVFIKNTKVQKFDENEGFK
PHDEWMLDTEGVNLLAVMCHDEVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
GSYVNYRHLAILCDTMTYRGHLMAITRHGFNRNDTGPMMRCSFEETVDILVDAAVYAETD
YLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMEGLDFGMTPARSPISGT
PYHEGLMSPSYLLSPNLRLSPTNDAQFSPYVGRIPFSPTSSPGYSPSSPGYSPSSPGYSP
TSPGYSPTSPGYSPTSPAYSPSSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY
SPTSPGYSPTSPSYSPTSPSYSPTSPSFNPQSAKYSPSLAYSPSSPILSPSPYSPTSPNY
SPTSPSYSPTSPSYSPSSPTFSPSSPYTSGASPDYSPTSPNFSPSTGGYSPSQPGYSPSS
TSQYTPQTNGKDDKSTK
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagattccctttctcccccgcggaggttgcaaaagtccgaagggttcagttc
ggaattctcagtcccgacgagattaggcaaatgtcagttgtgcaaatcgagcacggcgaa
accacggagagaggaaagcctaaaattgcaggattgagtgatcctcgcctcggaactatt
gatcggaagatgaaatgtgagacttgtactgctagtatggctgagtgccctggtcatttc
gggcacttggagcttgctaaaccaatgtttcatatagggtttttgaaaactgtgctcaat
ataatgcgttgtgtttgcttcaattgctctaaaattcttgctgatgagaatgaccataag
tttaaacaagctttgagaactaggaacccgaaaaataggcttaagaaaattttggatgct
tgcaaaaacaaaaacaagtgtgaaggtggagatgagattgacattgctggtggtcaagat
actgaggaagccattaagaagagtcgcggtggttgtggtgctcagcaacctaggattagt
attgatgggatgaaaatgattgcagagtataaagctcaaagaaagaaaagtgatgaccag
gaacagcttcccgaacctgtagaaaggaaacagactctttctgcagaaagggtcctttct
gtgttgaaaaggataagtgatgaggactgtcaattgttgggtttggatccaaagtatgcc
cgtcctgattggatgattttacaagttcttccaattccccctccacccgtgagaccttct
gtaatgatggacacgtcttccaggagcgaggatgatttaactcatcagttggccatgatc
atcaggcacaatgagaatctgaagaaacaggagaggaacggatcacctgcacatattatt
tcagagtttgctcagttgttgcagttccacatagccacatattttgataatgagttgccg
ggattgccaagggccactcaaagatcaggaaggcctatcaaatcaatatgtagtaggctt
aaggcaaaagaaggtcgaattagaggtaacttgatggggaagagggttgatttttctgca
cgaactgtaatcacgccagatccaaccatcaacatagatcaattgggagtaccatggagt
attgctttgaatcttacatatcctgagactgtgactccatataatattgaaaggttgaag
gaacttgttgagtatggaccccatcctccacctggaaaaactggtgccaagtacatcatt
cgtgatgatgggcaaaggcttgatctcagatatttaaagaaaagtagcgatcaccatttg
gagcttggatacaaggtggagcgtcatttgaatgatggggactttgttctattcaatcgc
cagcccagtcttcataaaatgtctatcatgggtcatagaatcaaaatcatgccttattct
acttttcgtcttaacttgtcagttacttcaccatataatgctgattttgatggggatgaa
atgaatatgcatgttcctcagtcatttgaaaccagagcagaggtgttggagctgatgatg
gtgcctaaatgcatcgtgtcacctcaatcaaacaggcctgtaatgggaattgtccaagat
tcgcttttgggatgcagaaaaatcacaaagagagataccttcatcacaaaggatgttttt
atgaacattttgatgtggtgggaagattttgatgggaaagttcctgctcctgcaatatta
aagccagagccattgtggaccgggaaacaagttttcaatctcatcattcctaaagcaata
aatctgattagatattctagctggcacaatgagagtgaaagggggtccataacccctggg
gatacaatggtcagaattgaaaaaggggaactacttactgggacactttgcaaaaagaca
cttggagcatcttctggaagtctcattcatgtcatctgggaagaggttggaccggatgca
gctcgtaaatttctaggtcatactcagtggcttgtgaactattggcttttgcagcaggcg
tttagcatgggaattggtgatacaattgctgatgcgtcaactatggaggttattaatcag
actatttcacaagctaaggagaaagtgaagcaactcatcagggatgctcaagaaaagaag
ttggaggctgaaccgggtcggactatgatggattcatttgaaaatagagtgaaccagaca
ttgaatagagctcgtgacgatgccggaaatagtgcacagaaaagtttatctgagagcaat
aatctaaaagcaatggttacagccggttccaaaggaagttttatcaacatttctcagatg
acggcttgtgtgggccaacaaaatgtcgagggtaagcgaattccatatgggttcgtagat
cggacgttgccccactttacaaaagatgattatgggcctgaaagtcgtggctttgtggag
aactcgtatctccgaggactgaccccacaagagttctttttccatgccatgggtggtagg
gaaggtcttattgatactgcagtgaagacttctgaaactgggtacattcagaggcgactt
gtgaaggctatggaggatatcatgtgtaaatatgatgggacagttaggaactctttggga
gatgttatacaatttctatatggcgaagacggaatggatgcagtttggatagaaacacag
aagctggattccctaaaaatgaagaaaacagaatttgatagggtttttcggcacaacttt
gatgatgaaaactggaaacctaattacatgcttgaagagtctgtagaagatttgaaaagc
ttcaaagagtttcgtagtgtgtttgaggcggaactccacaagcttgaaactgacagattt
caacttgcaacagagatagccactactggtgacagttctctgccactacctgttaacctt
aagaggcttatctggaatgctcaaaagaccttcaaggttgacttccggaggacttctgat
attcatcctatggaaattgtggacgcgattgataagctccaggagagacttaaggttgtt
cctggtgatgatcttttgagtcaagaagctcagaaaaatgcaactcttctgttcaatatt
ctgcttcgtagcacttttgccagtaaaagggtcctggaggaatacaggctttctcgtgag
gcatttgaatgggttgtgggagaaatagaatcaaggttcctgcaatcacaggtagcctct
ggggagatgattggttgtgtagcagcacaatcaatcggtgaacctgccacccaaatgact
ctcaacacctttcactatgctggtgtcagtgctaagaatgttacacttggtgttccaagg
ttacgagaaatcattaatgtggcaaagagaatcaaaacaccttctctgtctgtgttcttg
aaacctgaggttggtaagaccaaagagagggccaagaatgtgcagtgtgctttagaatat
acaactcttaggagtgtgactcaggctacagaggtgtggtatgatcctgacccaatgggt
acaataattgaagaggatgttgactttgtgaagtcctactatgaaatgcctgatgaagaa
gttgctcttgacaaaatctctccttggttgcttcgcatagaacttaatcgtgaaatgatg
gtggataagaagttgagtatggctgacattgctgaaaagattaaccttgaatttgatgat
gatctgacctgcatatttaacgatgacaatgctgaaaaacttattcttcgtatccgtatt
atgaatgatgaagcccccaaaggagagattcaggatgaatcagctgaagatgacgttttc
ttaaagaaaatagaaggcaacatgctgactgaaatgaccttgcgaggtatcccagacatc
aacaaagtttttataaaaaacactaaagttcagaagtttgatgagaatgaaggttttaag
cctcatgatgagtggatgcttgataccgaaggtgtcaaccttttagctgtaatgtgccat
gatgaagtcgatgcaaccaggaccacaagcaatcatttgattgaagttattgaagttctt
ggtatcgaggcagttcgccgggctcttctggatgaattacgtgttgtcatttcttttgat
ggttcatatgtcaattacaggcatctggccattctttgtgataccatgacttaccgcggt
catttgatggcaattacacgtcatggtttcaacaggaatgatactgggccaatgatgaga
tgctcgtttgaagagactgtcgatattcttgttgatgctgcagtatatgctgagactgat
tacttgaggggtgttactgaaaatattatgttaggtcagcttgcccccattggcactgga
gaatgtgccctgtatctgaatgatgagatgctgaagaatgctattgagctgcagctacct
agttacatggaagggcttgattttggcatgacgcctgctcgttcaccaatttctggaact
ccatatcatgaaggcttgatgtctccaagctatttgctgagcccaaatctacggctgtca
cctaccaatgatgcccagttttctccttatgttggtagaataccattttcgcctacttca
tctcccggttacagtccgtcatcacctggctatagtccgtcatcacctggatacagcccc
acatcacctggatacagtcccacgtcacccgggtacagccctacctctccggcttacagc
cctagctcgccaggttatagcccaacaagcccgtcatattcacctaccagtccatcgtac
tctcccacatctccgagctacagccccacatctccgagctacagccccacatctccgagc
tacagccccacatctccgagctacagccccacatctccgagctacagccccacatctccg
agctacagccccacatctccgagctacagccccacatctccgagctacagccccacatct
ccgagctacagccccacatctccgagctacagccccacatctccaagctatagccctaca
tccccaagctacagccccacatcccctgcatatagtcccacatccccatcctatagtcca
acatccccatcctatagtccaacatccccttcctatagtccaacatccccttcctatagt
ccaacgtccccttcctacagtccaacatccccttcctacagccctacatcacctgcgtac
agccctacttcccctggctacagccctacatcacctagctacagccctacttcacctagc
tacagccctacttcacctagtttcaacccacagtcagcgaagtatagtccttcactagca
tattcaccaagcagcccaatattgtctccaagtccatatagtcccacatctcccaattac
agcccaacatctccatcatattcaccaacgtctccatcttattctccatctagcccaact
ttcagccccagcagcccatatacttccggtgcaagcccagactatagcccaacttcccca
aattttagtcctagtacaggagggtactcaccaagtcaacctggctactcaccatcctca
accagccagtacactccacagacgaatggcaaggatgataagagcactaaatga
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integrated database retrieval system
