Lupinus angustifolius (narrow-leaved blue lupine): 109356841
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Entry
109356841 CDS
T04664
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109356841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109356841
03012 Translation factors [BR:
lang03012
]
109356841
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109356841
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109356841
Translation factors [BR:
lang03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109356841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
Ank_2
AAA_22
ATPase
AAA_19
Ank_5
nSTAND3
Rad17
AAA_23
T2SSE
AAA_7
FoP_duplication
ABC_tran
AAA_16
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
109356841
NCBI-ProteinID:
XP_019455953
UniProt:
A0A4P1R833
LinkDB
All DBs
Position
LG09:21239478..21247194
Genome browser
AA seq
1202 aa
AA seq
DB search
MTRKRENRGGGRGGGGGGGGSGGGGGRGPIHRQNLKVDELTRIRISKILEDFLASNDEVY
KFDANLSNQERAWVHQVAQKMGLKSKSYGFGNDRRVSVQKMKKMVDTNNGFGSLPPFSFS
QEANQALGDLFTHYPPDGVNSWEAVGENVVTPEKIKQKKDDIFSRPSMTKAEIAKKVEAL
ATRITKAPNLRQITEDRSKLPIASFIDVITSTVESHQVVLISGETGCGKTTQVPQYILDH
VWGKGEACKIVCTQPRRISATSVSERISSERGENIGENVGYKIRLESRGGRQSSIVLCTT
GVLLRVLVSKGSRGTKMGSAKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSHPHLH
LILMSATIDAARFSQYFGGCPVINVPGFTHPVKTFYLEDVLSIVKSRNDNHLDNTTLSNP
MNNHEPSEEEKLSIDEAIDLAWSNDEWDLLLELVSSEGTPKVFNYQHSLTGITPLMVFAG
KGRVGDMCLLLSFGADCHLVAKDGTTALEIAEKENQPEAAEILKKHMGSDSSNSMEEKKL
LDNYLSTINPELVDVVLVEQLIRKICFDSEEGGILVFLPGWDDINRTREKLLASSFFKNS
SKFVVISLHSMVPAMEQKKVFKRPPNGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKS
YDPYNNVSTLQSSWVSKASARQREGRAGRCQPGICYHLYSKLRAASLPDFQIPEIRRMPI
EELCLQVKLLDPSCKIEEFLRKTLDPPVFESIRNAIIVLQDIGALTVDEKLTQLGEKLGL
LPVHPSTSKMLFFAILMNCLDPALTLACASDYRDPFTLPMLPEEKKRAAAAKSELASLYG
GCGDQFAVVAAFECWGNAKKMGLESRFCSEYFVSSSAMNMLSGMRKQLQAELIRNGFIPE
DVSRYSMNAYDSGVLHAVLVAGLYPNVGRFLPNKGGKRVLIETAGGDKVRLHNHSTNIKL
TFKKNLDHTLIVYDEITRGDGGMNIRNCAVVGPLPLLLHSTEIAVAPANDNDDGDEDEDD
EGSGDENEDEDEVETGDGMELDAKSSENCEDKFMSSPDSLVRIIMDRWVYFGSTAIDVAQ
LYCLRERLSAAILYKVTHPRSTLPPILGASMHALACVLSCDGCAGMPMMADGVDKLTSMV
YATNLGQSAPTLTRRMGKKPKGPFTEHINKHQNPGPSSQVSISASKSIANTSGINPKPSP
SK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaaaaagagaaaatagaggaggaggaagaggtggtggtggtggtggaggagga
agtggtggaggaggaggtagaggaccgattcaccgtcaaaatctcaaggttgatgaactt
accaggattcgcatttctaagattctagaagattttctagcttctaatgatgaagtgtac
aaatttgatgctaatttgtccaaccaagagcgtgcttgggtgcatcaagttgcacaaaaa
atggggctcaagtctaaaagctatgggtttgggaatgataggagggtgtctgttcaaaaa
atgaaaaagatggttgacaccaataatgggtttgggagtcttcctcctttctcattttct
caagaggcaaatcaggcgttaggtgatttgtttactcattatccacccgatggcgtaaac
tcgtgggaggcggtaggagaaaatgttgtcactcctgaaaaaattaaacaaaagaaagat
gatattttcagtaggccctctatgaccaaagctgaaattgctaagaaagtggaagccctt
gctactagaataacgaaagcccccaacttgagacagatcactgaagacagatctaagctt
ccgattgcatcattcatagatgtcattacatcaactgttgaatctcaccaggtagttctc
atatctggtgagactggctgtggaaagactacacaggttccacaatatattttggatcat
gtgtggggtaagggtgaggcatgtaaaatagtttgcactcagcctcggcgtatctctgca
acttcagtttcggagagaatctccagtgagagaggagagaacattggagaaaatgttgga
tataagatacggttggaaagcagaggtggaaggcaatcatcaattgttctatgtactact
ggagttctattaagggtgttggtctctaaaggttctcgtgggacaaagatggggtctgca
aaggatgacatttcgggcatcactcacataattatggatgaaattcatgaaagggaccga
tactcagacttcatgttagcaatcatcagagacatgctccctagtcatcctcacctacat
ctgatactaatgagtgctacaattgatgctgcaagattttcccaatattttggtggttgc
ccagttatcaatgttcccgggttcactcatccggtcaaaacattctatttggaggatgta
ctttccattgtaaaatctagaaatgataatcatctggataataccacattaagtaatcca
atgaacaatcatgagccaagtgaagaagagaagctttcgattgatgaagctatagatttg
gcttggtctaatgatgagtgggacctgctgttagagttggtttcttctgaaggaacgcca
aaagtcttcaattatcagcattcgttaactggcattactccattaatggtgtttgctgga
aaaggtagagttggtgatatgtgcttgctcttatcttttggggcagattgccatttagtg
gccaaagacggaacaactgctctggagattgcggaaaaagaaaaccaaccagaagctgct
gaaatactgaagaagcacatgggtagtgattcttccaattccatggaggagaagaagtta
ctcgataactatctttcaacaatcaacccggaacttgttgatgttgttttagttgagcag
ctgataagaaaaatatgttttgattcagaagaaggaggtatccttgtatttcttccgggt
tgggatgatataaatagaacacgtgagaaattgcttgcatcctcttttttcaagaactcc
tccaagtttgtggtcatatctctgcattcaatggttccagcaatggagcaaaagaaggtt
tttaagcgcccacccaacggttgccgcaaaattgttctctcaactaatattgctgaaaca
gctatcaccattgatgatatagtgtatgtcattgacactggacggatgaaagaaaaaagc
tatgatccttataataatgtgtcaactcttcaatcatcttgggtttcaaaagcaagtgct
aggcagcgagagggacgtgctggccgctgtcagcctggaatctgctatcatctatattca
aagctccgagcagcttctttaccagattttcagattccggaaattaggagaatgcctatt
gaagagctatgtctgcaggtaaagttgcttgatccaagctgcaaaatagaagaatttctg
aggaagacattagatcctccagtttttgagtccatacgcaatgctattatagttcttcaa
gatattggggcattgacagttgatgaaaaactcacccaactaggggagaagcttggttta
cttcctgttcacccatcaaccagcaagatgcttttttttgctatattgatgaactgcctc
gatccagctttaactctagcatgtgcatctgattatagagatccatttacacttccaatg
ttacccgaagaaaagaagagagctgcagccgccaaatccgagctcgcatctttatatggc
ggttgtggtgatcagtttgctgtagtagctgcatttgagtgctggggtaacgctaagaaa
atgggtctagaatcgcggttttgttctgagtattttgtgtcttcaagtgccatgaatatg
ttatcgggcatgcgtaaacaactccaagcagaactcattcgaaatggttttattcctgaa
gatgtttcacgttacagtatgaatgcatatgactctggtgtactccatgcggttttggta
gcaggtttgtatccaaatgttggcagatttttaccgaataaaggtgggaaaagggttctt
attgaaactgcaggtggtgataaagtccgcttgcacaatcattccacaaatatcaagttg
acattcaagaaaaatttagatcacactttaattgtgtatgacgagattactcgcggcgac
ggtggtatgaacataaggaactgtgcagttgtcggaccacttcctcttttactgcattca
acagagattgctgttgctcctgcaaacgataatgatgatggggatgaggatgaggatgat
gaagggagtggcgatgaaaatgaagatgaagatgaagttgaaactggagatgggatggag
cttgatgcaaagtcaagtgaaaactgtgaagataagtttatgtcatctcctgatagtctg
gttagaataatcatggatcgctgggtttattttggttcaacagcaattgatgttgctcag
ctatactgcttgagagagcgtttatcggctgcaattttatacaaagtgacacatccaagg
agtactcttcccccaatcctgggagcctctatgcatgctttagcttgtgttctgtcctgc
gacgggtgcgctggcatgccgatgatggcagatggtgttgacaaactgactagtatggta
tatgcaacaaatttaggccagtcagcaccaacattgacaaggaggatgggtaagaagccg
aaaggaccatttacagaacatataaacaaacatcaaaaccctgggccttcttctcaagtt
agcatatctgcttctaagagcatagcaaatacaagtgggatcaatcccaaaccaagtcct
tccaaatga
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