Lupinus angustifolius (narrow-leaved blue lupine): 109357047
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Entry
109357047 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109357047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109357047
03036 Chromosome and associated proteins [BR:
lang03036
]
109357047
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109357047
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109357047
mRNA degradation factors
5'-3' decay
Decapping complex
109357047
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109357047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
TFIIA
Motif
Other DBs
NCBI-GeneID:
109357047
NCBI-ProteinID:
XP_019456295
UniProt:
A0A1J7HEE2
LinkDB
All DBs
Position
LG09:12529673..12536695
Genome browser
AA seq
505 aa
AA seq
DB search
MDNSNNNNRGRYPPGIGYGRGGGGGGFNLNPNQNQNAAFQPRNNYQQQQNQQQHYVQRHL
VPQQQQQQQQQQWLRRAQLGGGADSNVVDEVEKNVQNEANDSSSQDWKARLKAPPADTRY
KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIVLTGSDILARAKNGTG
KTAAFCIPALEKIDQDTNVIQAVILVPTRELALQTSQVCKELGKHLKIEVMVTTGGTSLK
DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCTMLVMDEADKLLSPEFQPSIQHLIQF
LPSNRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLN
TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
YRIEQELGTEIKQIPPFIDQAVYCR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagtaacaacaataacagagggagatacccacctggtataggttatggtcgt
ggtggtggtggtggagggttcaatctgaaccctaaccaaaatcaaaacgcagcgtttcaa
ccaaggaacaattatcagcaacagcagaatcaacagcaacactatgtgcagaggcatttg
gttccgcagcagcagcaacaacagcagcagcaacagtggctgagaagggcacagttgggt
ggtggtgcagattcaaatgtcgtcgacgaggtcgaaaagaatgtccagaatgaagcaaat
gactcaagttcacaagattggaaggcaagactaaaggctccaccagctgatacacgctat
aagacagaggatgtgacagcgactaaaggaaatgaatttgaggattactttttgaagcgt
gagctgctcatgggaatatatgagaagggttttgaaaggccttctcctatccaagaagaa
agcattccaattgtccttactggtagtgacattcttgctagggcaaaaaatggaacaggc
aaaacagccgcattttgcattcctgcattggaaaaaattgatcaggatactaatgttatt
caagctgtcatactggtccctactcgagaattggctttgcaaacatctcaagtgtgtaaa
gagcttggaaagcatttgaaaattgaagttatggtcacaacaggtggtaccagcttgaaa
gatgatataatgcgcttatatcaaccagttcatttactagttggaactccaggaagaata
ttagatcttgctaagaagggtgtttgtattctgaaagattgcactatgcttgttatggac
gaggctgataagcttttgtccccggagttccaaccttctattcagcatctgattcaattt
ctaccttcaaaccgtcaaattctaatgttttcagctacatttcctgttactgtaaaggac
ttcaaagatagatatcttcaaaaaccatatgtcattaaccttatggatgagctaactctg
aagggtattacacaatactatgcatttgtcgaagagaggcagaaagtccactgcctgaat
actctattttctaagctgcaaataaaccagtcgatcatcttctgcaattcagtgaaccgg
gttgaactccttgccaagaaaatcacagaacttggttattcgtgtttctatattcatgca
aagatgttgcaagaccatcgtaatagagtatttcatgacttccgcaatggtgcatgccga
aatcttgtttgtactgacctttttactaggggaatagacatccaagcagtcaatgttgtt
attaattttgattttccgaagaactcagaaacttatttgcacagggttggtcgttcaggg
aggtttggacaccttggtctagcagtgaacttgatcacttatgaggatcgctttaactta
tataggattgaacaggaacttggcactgaaataaagcaaattcctccatttattgatcag
gcggtttattgccggtga
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