Lupinus angustifolius (narrow-leaved blue lupine): 109358314
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Entry
109358314 CDS
T04664
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109358314
03036 Chromosome and associated proteins [BR:
lang03036
]
109358314
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109358314
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109358314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
Tex_central_region
HHH_9
SH2
HTH_44
HHH_3
Tex_N
S1
Motif
Other DBs
NCBI-GeneID:
109358314
NCBI-ProteinID:
XP_019458019
LinkDB
All DBs
Position
LG10:complement(11629664..11639959)
Genome browser
AA seq
1633 aa
AA seq
DB search
MARGVISDDEDEVELDEEEREPVDGDGLEEGRDVDDDEEDEEEEGQDEYENDGFIVDEDE
EEQDEEERAESDEERQKRRKKKRKEEYVLDEDDYELLEDNNINIHRRKDIKKFKRLKKGQ
RDTEEEPSGLSDEEDFVGSGKVGRTAEEKLKHRLFGDDEGAPLEDIVEDEEQGEEEEEDA
DIGEDDEMADFIVDEEEVDENGAPMRRTKPKRKTRQAHGVSSSAVQEAQDIFGDVDNFLL
TRKKNLESNEYRETRLEDEFEPIILSEKYMREEDDQIREVDLPERMQISEMSTGTPPLDG
SIDEESQWIVKQLSEGAVPWICKKIPTSQNNRKNLPIDENDIIRFLELYHVQKLDIPFIA
MYRKEECLSLLKDLERPEAGGESLDKNNMTPTPKWHKVLWALLDLDRKWLLLQKRKVALE
SYYTKRFEEESRRIYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAG
VDEGQYKRPKRKSVYSTYSKAGLWEVANRFGCSSEQLGICLSEVKVPELVDPKETPEEMA
SNFTCAMYNTPEEVLKCARHMAAIEVSCEPSIRKHVRSHFLDHAVVSTCPTADGNVAIDS
FHDFAVVKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIMLPEENLNKLIDQFNEYYVSD
SVSRSAQLWNEQRKLILHDAIFRLLLPSMEKEARGVLASKAKNWLLMEYGKALWNKVSVG
PYQQKENDLSSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNAGD
QQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDLYEVIFKMVEENPRDVGHEMDG
LSVVYGDESLPRLYENSRISSEQLPSQQGIVRRAAALGRYLQNPLAMVATLCGPRKEILS
WKLNSLESFLNPDDKFGMVEQVMVDVTNQVGLDINLSISHEWLFSPLQFISGLGPRKAAS
LQRSLVRAGAIFTRKDFLKEHKLEKKVFVNAVGFLRIRRSGLAASSSEYIDLLDDTRIHP
ESYVIAQELAKDVYEEDGTGDANDDDDALDLAIEHVRERPSYLKNLDVVEYATAKEEQKK
KQQQTVINLLKKIETLHDIKSELIQGFQDRRKQYEEPSQDEEFYMISGETEETLAEGKIV
QATVRRVQAQKAICGLDSGMTGILMKEDYSDEYRDIIELSDRLHEGDMLTCKIKSIQKNR
YQVFLVCKDSEMRSNRLQNSRDFDPYYHEDIRCLQSEHDKARKQKELAKKRFKSRMIIHP
RFQNITADEAIELLSNKEPGESIIRPSSRGPECLTLTLKIHDGVYAHKEIVEGGKERRDI
TSLLQIGKTLKIGDDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRRGTKAEIDELLRIEK
AENPMRIVYSFGILHEHPGTFILTYIRSTNPHHEYIGLHPKGFRFRKKMFEDIDRLVAYF
QRHIDDSHHDSTPSIRSVAAMVPMRSPAAGGSSGASGGGGWGGSHSEGGRRGHSYDRDRS
STPGSRTGRADYRNNGNRDEHPSGLPRPYGGGRGRARGSYNDNRGHGSNNERQDSGYAGG
RWVSNTREGGDGLSNFPGAKVQNSPGREAFPGGWGGGAGSGDAEHGSSGSGTASKKASDN
GWGSAIAGSGSGW
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggccagaggcgtaatctcagacgacgaagatgaggttgaactcgacgaggaagagagg
gaacctgtcgatggagatggattggaggagggtcgcgatgtggatgacgatgaagaggat
gaagaagaagaagggcaggatgaatatgaaaatgatggatttatagttgacgaggatgaa
gaggagcaggatgaagaagagagagcagaaagtgacgaggaacgccagaagaggagaaag
aagaagagaaaggaggaatatgtccttgatgaagatgattatgagctgctggaagacaat
aacatcaatattcatcgtcggaaggacattaaaaagttcaagcggctgaaaaaaggccag
agagatactgaggaggagccgtctgggctatctgatgaggaggattttgttggaagtggt
aaagttgggcgaactgctgaggagaagcttaaacaccgtttatttggcgatgatgaagga
gctccacttgaggatattgttgaagatgaggaacaaggagaggaggaggaggaggatgca
gacattggagaagatgatgaaatggccgacttcattgtggatgaagaagaagttgatgag
aatggagctcctatgagacgaacaaagccgaagagaaaaactaggcaggcacatggagtc
tcttcctcagctgttcaagaagctcaagatatattcggtgatgttgacaactttctgctg
actcgcaagaaaaatctagagtcaaatgaatatagagagactagacttgaagatgaattt
gagcctattattctttctgagaagtatatgagagaggaggatgaccagattagggaagtt
gatcttccagagagaatgcagatatcggagatgagtactggcactcctccactggatgga
agtatagatgaagagagccagtggatagttaagcaacttagtgaaggggcagtcccttgg
atttgcaaaaaaattccaacctcccaaaataatagaaagaacctaccaattgacgaaaat
gatattatcagatttttggaactgtatcatgtgcaaaagttagatattccttttattgct
atgtatcggaaggaggagtgcttaagcctgttgaaagacctagagcgacccgaagctggt
ggtgagagtttggataagaataacatgacacctactccaaagtggcacaaggtgctttgg
gctcttctggacttggataggaagtggttgcttcttcagaagcggaaggttgccttagag
tcgtactatactaaacggtttgaagaggagtcccggcgtatttatgatgaaacaagacta
aacttgaaccggcaattatttgaatcagttatgagatcattgaaggaggcggaatctgag
agggaggttgatgatgttgactccaagttcaacttgcatttcccaccaggtgaagctggc
gttgatgaaggacagtacaagaggccaaaaaggaagtcagtatatagcacttacagtaag
gcaggcctgtgggaggttgcgaacaggtttggatgtagttctgagcagcttggaatatgt
ctatctgaagttaaggtgcctgagttggtagacccaaaggaaacaccagaggagatggct
tcaaactttacatgtgctatgtataatacccctgaagaagtacttaagtgtgctaggcac
atggcagctattgaggtaagttgcgaacctagcattaggaaacacgttcgtagccacttt
cttgatcatgctgtggtgtcaacatgtcctactgctgatgggaatgtagcaatagattct
tttcatgactttgctgtggtaaagtggctccgagagaagcctctgtctaaatttgaagac
gcacagtggcttcttatacagaaggcagaagaggagaaacttcttcaagtcactattatg
cttcctgaagagaatcttaataaattaattgaccaattcaatgagtattatgttagcgat
agtgttagcagatctgctcagctgtggaatgaacagaggaagttgatactgcatgatgca
atttttcgccttcttttaccgtcaatggaaaaagaggcaagaggtgtattggcaagcaaa
gcaaagaattggttacttatggagtatgggaaggccttgtggaataaggtttctgtggga
ccttatcaacagaaggagaatgatcttagctctgatgatgaggctgctcctagggttatg
gcctgctgttggggccctggaaagccacaaacaacatttgttatgttggattcatcaggg
gaagtgctagatgtgctttacactggatcccttactttaaggtcacagaatgctggtgac
caacaacggaagaagaatgaccaggaacgcgttttgaagtttatgacagatcaccaacca
cacgttgttgttttaggtgcagtaaatttgtcttgcactcgtttaaaggaagatctatat
gaggtcatttttaagatggtagaggaaaaccctagggatgttgggcatgaaatggatggg
ctcagcgttgtgtatggagatgaatctcttccccgtctttatgaaaattctcgaatttcc
tctgaacaacttccttcccagcaaggtatagtcaggcgggctgctgctcttggacgatat
ctccagaacccattggcaatggttgcaaccttatgtggacccagaaaggaaatattatca
tggaaactgaactctttggagagctttctcaacccagatgataaatttgggatggttgag
caggttatggtggatgtgaccaatcaggttggcttagacattaatttatcaataagtcac
gagtggttattttctcctttacaatttatttctgggcttggtccacggaaggctgcatcc
ttacagagatccttggtaagagctggtgcaatttttaccaggaaggattttttgaaagaa
cataagctggagaaaaaggtttttgtcaatgcagttggtttcttgcgtatccggcgaagt
gggttggctgctagcagcagcgaatatattgatttgctggatgatacaagaattcatcca
gaatcatatgttattgcacaagagttggccaaagatgtgtatgaggaggatggcacaggt
gatgcaaatgatgatgatgatgcattggatttggccatagagcatgttagagaaagacct
agttatttgaaaaaccttgatgttgtggaatatgctactgcgaaagaagaacaaaaaaag
aaacaacaacaaactgttatcaaccttcttaagaaaatagaaactttgcatgacataaaa
agtgaattgattcaaggttttcaggatcgtcgtaagcaatatgaagaaccaagtcaagat
gaggaattttatatgatttcaggtgagactgaggagactcttgctgaaggtaaaattgtc
caagccacagttcgcagagtgcaggcccagaaagcaatatgtggacttgactctggaatg
actggaatcctgatgaaagaagactattcagatgaatatagagatataattgaattatct
gataggctacatgaaggcgacatgctcacatgtaaaatcaagtcaattcagaaaaatagg
tatcaagtcttcctcgtttgtaaggatagtgaaatgagaagtaatcggctacagaacagc
cgtgattttgacccctattaccatgaagacatacgctgtttgcagagtgaacatgacaaa
gctcggaaacaaaaagagcttgcaaagaagcgtttcaagtcaaggatgataattcatccc
cgctttcagaacataactgcagatgaagcaattgagttattgtctaacaaagaacctgga
gaaagcattatccgccctagctcacggggaccagagtgtcttactctaactctcaaaatt
catgacggggtatatgcacacaaggaaatagttgaaggtggaaaggagcgtagggatatt
acaagcttacttcaaattgggaagacactgaaaattggagatgacacattcgaggattta
gatgaggttatggaccgttatgttgatccccttgtgactcacttgaaggcaatgttaaac
tatcgcaagttcagaaggggcacaaaagcagaaattgatgaacttttgaggatagaaaaa
gctgagaatcctatgcgcatagtctacagttttggcatcttgcatgaacatcctggcaca
tttatattaacttatataagaagtacaaatccacaccatgagtatattgggcttcatcca
aaagggttcaggttccggaaaaagatgtttgaggacattgatcggctcgtggcttatttt
cagaggcatattgatgattcccaccatgattcaaccccctccattagatctgttgctgct
atggtaccaatgagaagtcctgcagctggtggctcatcaggggcatctgggggtggcggc
tggggtggttcacacagtgagggtggtcgaagaggtcattcttatgatagggatcgatct
tctactcctggttctaggacaggacgggctgattatagaaacaatggtaatcgtgatgaa
caccccagtggactgcctcgtccatacggtggtggtcgtggccgtgctcgaggttcttat
aacgacaacagaggacatggctccaataatgaaaggcaggactctggctatgctggggga
agatgggtttctaatacacgggaggggggtgatggtttaagcaatttcccaggagctaag
gttcaaaattcccctggaagggaagcttttcctggtggttggggtggtggagccggttca
ggtgatgctgaacatggaagctctgggtcaggaactgcctccaagaaagcatccgacaat
gggtgggggtctgcaattgccggcagtggctctggttggtga
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integrated database retrieval system
