Lupinus angustifolius (narrow-leaved blue lupine): 109358405
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Entry
109358405 CDS
T04664
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109358405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109358405
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109358405
Spliceosome [BR:
lang03041
]
Complex C
Other components
Step II factors
109358405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Sigma54_activ_2
Cas3-like_C_2
AAA_16
nSTAND3
AAA_30
TsaE
ABC_tran
GIPC1_GH2
Flavi_DEAD
PhoH
Motif
Other DBs
NCBI-GeneID:
109358405
NCBI-ProteinID:
XP_019458152
UniProt:
A0A1J7GSK6
LinkDB
All DBs
Position
LG10:complement(4327058..4337474)
Genome browser
AA seq
1209 aa
AA seq
DB search
MAVDNPEDGLKKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDSKLK
ENGAEMPDYFVRILLTIIHAILPHNKSRKVDSMKESSAITTNTKFKALVIADDRDRVKEL
QKEIEIEIETEAVRQMDREREEEHGYRDIDKRDRHRDRYGRDDRHRNRDRDRGVDEGERR
DDYRRRDRDVDEDERRDDYRRQGRDRDKDRGRDRYDKDRRDRYEENERGRENADENGDRK
GRRDLRHGGGSSEPELYMVYKGRVSRVMDTGCFVQLDEFRGTEGLVHVSQIATRRITNAK
DVVKRDQEVFVKVISVSGQKLSLSMRDVDQHTGRDLLPLKKSSDDDVSRMNPQDSKDGPV
VRTGLSGIRIVEEDDVGKFHRPLKRMSSPEIWEAKQLIASGVMSVSEYPTYDDEGDGMLY
QEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERRE
VREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTIT
FGQRSKLSIQEQRQSLPIYKLKKELTQAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYTT
RGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE
ILVDENLSQYSIIMLDEAHERTIYTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYF
FNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFS
CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTID
GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR
NEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE
EGLLTKLGRKMAEFPMDPPLSKMLLASVDLGCSDEILTIVAMIQTGNIFYRPREKQAQAD
QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKY
KLDVLSAGKNFTKIRKAITAGFFFHAGRKDPQEGYRTLVENQPVYIHPSSALFQRQPDWI
IYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPN
SWRLSKRRA
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagataatccagaagatggattgaagaagaagctagaatacttatcactcgta
tcaaaggtttgtaccgagttggaatcccacaccggcaccggcgacaaggtcctcgctgag
ttcataaccgagttaggtcgttcttcagaaaacgttgaagaatttgattcaaaactgaaa
gagaacggtgctgaaatgcccgattacttcgtccgaatacttctcaccataattcacgcc
attcttcctcacaataagtctaggaaggtagattctatgaaagagagttctgcgattact
actaatactaagtttaaggctctggtcattgctgatgatagagaccgcgtaaaggagctt
cagaaggaaatcgaaatcgaaatcgaaaccgaagcagtgcggcaaatggacagagaacga
gaagaagaacatggttatagagatatagataaaagggatagacacagggatcggtatgga
agagatgatagacataggaatagggatagagacagaggtgtcgatgaaggcgaaagaagg
gatgattataggagaagggatagagatgttgatgaagatgaaagaagggacgattatagg
agacaggggagggatagagataaggataggggaagggatagatatgataaggatagaaga
gataggtatgaagaaaatgaacgtggaagggagaatgcggatgagaatggtgataggaaa
ggtcgtagagatttgaggcatggtggtggttctagtgaacccgagttgtatatggtttat
aaagggagagtgtcgagggttatggatacggggtgctttgttcagttggatgagtttaga
gggacggaaggtttggtgcatgtttcgcagattgcgactcgaaggattactaatgctaag
gatgtggtgaagagagatcaggaggtttttgtgaaggtgatatctgtttctggtcagaaa
ttgagtctttcgatgagggatgttgatcagcatacagggagggatcttcttccattgaag
aagagctcggatgacgatgtttctcggatgaatccacaagattcgaaagatgggccagtt
gtcaggacgggtctttcaggcatcaggattgtggaagaggatgatgttggtaagttccat
aggcctttgaagaggatgagctctccagagatatgggaagcaaaacagttgatcgcttcg
ggtgttatgagtgtttcggagtacccaacttatgatgacgagggagatggaatgctatac
caagaggaaggtgctgaggaagagcttgagatcgagatgaatgaggatgagcctgccttc
ttgcaagggcagagccgatattccatggatatgtctcctgttaagatttttaagaatcca
gaaggttctttgggtcgtgctgctgcgctccagtctgcacttataaaggagcgtagagag
gtacgagaacaacaacagcgcactatgcttgattcaattccaaaggatcttaatcgtcct
tgggaagaccctatgccagagtccggtgaaaggcatcttgcccaggaacttaggggtgtt
ggtttatcagcctatgatatgccagagtggaagaaggatgcttacgggaaaaccattact
ttcgggcaacggtcaaagctttctattcaggaacagagacagagtttgccaatttacaag
ttgaaaaaagagttaactcaggctgtccgtgacaatcaggtgttggtggtgattggtgaa
acgggttcgggtaagactactcaggtcacacagtatcttgcagaagctggttatacaaca
agaggaaaaattggatgtactcaaccacgtagggtggctgcaatgtcagttgcgaagagg
gttgcagaagagtttggttgtcgattaggggaggaagtcggttatgccattcggtttgag
gattgcactggaccggatactgtaatcaagtacatgacagatggtatgcttctcagggaa
atattggttgatgagaatctgtcacagtattcgattataatgcttgatgaggcccatgaa
aggactatttacactgatgttctttttgggcttctgaagcagctagtcaagcgtagacct
gaattgcgattgattgtcacatcggcgacactggatgctgagaaattctcaggatatttc
tttaactgtaacatttttacaattccagggagaacttttcctgtggagattctttacact
aaacaaccagaaagtgattacttagatgcatctttaatcactgtcctgcagatccacttg
acagaacctgaaggagacattcttctcttcttgactggtcaagaggagattgatttttct
tgccagtctctctatgagagaatgaaggggttaggtaagaatgtcccagagctgatcatt
ttgcctgtttatagtgcccttcctagtgaaatgcaatcaaggatatttgaccctgctcct
ccagggaagaggaaggtggttgtggctactaacatagctgaggcttctttgactattgat
gggatattttatgtcattgatccgggatttgccaagcaaaatgtttataacccaaagcaa
ggtcttgattctttggtgataactccaatttcacaagcatcagctaaacaaagagctgga
cgagcagggcgtactggacctgggaaatgttatcgcctctataccgaaagtgcatatagg
aatgaaatgtctcctacttcgattccagagattcagaggataaatcttgggacaactact
cttaatatgaaagctatggggataaatgatcttctgtcttttgattttatggatccaccg
tcacctcaagctcttatttctgccatggaacaactttacagtcttggagcgttggatgaa
gaaggccttttaaccaaattggggaggaagatggcagaatttcctatggatccaccattg
tccaagatgcttcttgccagtgtggaccttggatgcagtgatgagattttgaccatagtc
gccatgatccagactggcaatattttttacaggcctagggaaaagcaagctcaagcagat
cagaagagggcaaaatttttccagcctgagggtgaccatcttacgctgctcgctgtttat
gaggcttggaaagctaagaatttttctggaccctggtgttttgagaactttgttcagtct
cggtcattgagaagagcacaggatgtcaggaaacaacttctaaccatcatggataagtac
aaattggatgttctaagcgcggggaaaaatttcaccaagatcaggaaggctatcactgca
ggattctttttccatgcaggaagaaaagacccccaggaaggttacagaactctcgttgag
aaccagcctgtatatatccatccaagttctgctttgttccagagacagccagactggatc
atctaccatgagcttgtgatgactactaaggaatacatgcgcgaggttactgccatagat
cccaaatggcttgttgaattggctcctaggttcttcaaagtggcagatcctacaaagatg
agcaagcgaaaacgtcaagagcgtatagaaccactttatgatagataccacgagccaaac
tcatggcgtttgagtaaacgtcgtgcatga
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integrated database retrieval system
