Lupinus angustifolius (narrow-leaved blue lupine): 109358582
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Entry
109358582 CDS
T04664
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109358582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109358582
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109358582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
109358582
NCBI-ProteinID:
XP_019458437
LinkDB
All DBs
Position
LG10:10212469..10224942
Genome browser
AA seq
694 aa
AA seq
DB search
MNFDPASAKSSQILNTIKEISSSSRTIPSDKDFKLCYTSDEFKRPIDEIARKSNSMLQKI
GAAKHIWGTEEADFPVGIDDAYEWLVDVNQEVFGRVDESIKELQKIMKFEDDEMELENGK
KKKMKKVRVETKDKEKVSFHISAIEKPQNRYNFLVNNANQPFQHVWLERSDDGQRFIHPL
EKLSVLDFVDKDVEDLVPIEPPSLESTPFKLVEEVKGLKELAAKLHSVNEFAVDLEHNHY
RSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLRELFKDPTKKKVMHGADSDIVWLQRD
FGIYVCNLFDTGQASRVLKLERFSLQYLLLHYCGVIANKEYQKADWRLRPLPDVMLRYGR
EDTHYLLYIYDLMRIKLLALSKESESSDNLLVEVYKRSYDVCMKLYEKELLTEDSYLHIY
GLQGASFNGQQLAIVSGLYEWRDIVARAEDEGTGYVLPNKTILEIAKQMPVTTSHLRRLV
NLYLPYIERNLDVILSIVRHSVQNAPAFEEAALRLKEAHTASVSNALSSKDKAPGTLAKG
STGIENVTSVNISEKAPFSSDLKEESFQHQDKNGQITTKSNCPTSELPKDKGANVQLLKT
PTGDGGVLLGNSASKTELDYVKKAKEEVKLEQIGSSINLPLHSGTISTSTPADVIMIDSD
TDSEDMAQNNVGRDNEQRENEDEDDSSSFSDLSL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgatcctgcatccgccaaatcttcacaaattctcaacactataaaggaaatt
tcatcttcctcgcgaaccattccttccgacaaggatttcaaattatgctacacctccgac
gaattcaaacgccctatcgacgaaatcgccagaaaatcgaactcaatgttgcaaaaaatc
ggcgccgccaagcatatttggggcacggaggaagctgattttcccgtcggaatcgacgac
gcatatgaatggctcgttgatgtgaatcaagaggtttttggacgggttgatgagtcgatt
aaggagttgcagaagattatgaagtttgaggatgatgaaatggaattggaaaatgggaag
aagaaaaaaatgaagaaagtgagagtggaaacaaaggataaggagaaagtttcgtttcat
atatctgcgattgagaagcctcagaacaggtataactttttggttaataatgcaaaccaa
ccttttcagcatgtttggttggagagaagtgatgatggtcagaggtttattcatccactg
gagaaactctctgttttagattttgttgataaagatgttgaggatcttgtgccaatagaa
cctccctcattagaaagcacccctttcaagcttgtggaagaagtcaaaggattgaaggag
ttggctgctaagcttcattctgttaatgaatttgcggtggatttggaacataatcattat
cggtctttccaaggtttgacttgcttgatgcaaatctcaactaggactgaagattttatt
gtagataccctgaagcttcgtgttcatgttggaccttacctgagggaactcttcaaggat
cctaccaagaagaaagtcatgcatggagcagattcagatattgtgtggttgcaacgagat
tttggcatttacgtttgtaatttgtttgacactggccaggcttcaagggtgttaaaattg
gagagatttagcttgcaatatcttttgcttcactattgtggggttattgcaaacaaagaa
taccagaaagcagattggagactacggcctctacccgatgtcatgctgagatatggcaga
gaagatacacactatctgctgtacatatatgatttaatgaggatcaagttacttgcactg
tctaaggagtctgaaagttctgataatcttctggtggaggtttacaagcgcagttatgat
gtctgtatgaagctatatgagaaagaacttctgacagaagactcataccttcatatatat
gggttacaaggggctagttttaatggacagcagcttgccattgtttccgggctttatgaa
tggcgggacattgttgctcgtgcagaggatgagggtactggctatgtattgccaaataaa
actatacttgaaatcgctaagcagatgcctgtcactacaagccatctacgtcgattggta
aatttatatctcccatatattgagcgcaaccttgacgttattctcagtatcgttagacat
tctgtacaaaatgctcctgcctttgaagaagctgcactacgtttgaaagaagcccacaca
gcaagtgtatcaaatgcactatccagtaaggataaagctcctggtacgctagcaaaagga
agtactggaattgaaaatgtcacctctgttaatatctcagagaaggctccattttcttca
gacctgaaggaggaatcttttcagcaccaggataaaaatggacaaataacaactaaatcc
aattgtcccacttcagagctcccaaaggataaaggagcaaatgttcaattgcttaaaacg
cctactggtgatggcggggtacttctgggaaattcagcttccaaaactgagcttgattat
gttaaaaaggccaaggaagaggtcaagttggagcagatcggatcgtctatcaaccttcct
ttacattcaggcaccatttcgacttcaactccagctgatgttataatgatagactctgac
acggattcggaggatatggcacagaacaatgtaggaagggacaatgagcaacgggagaac
gaggatgaagatgactcgtcctctttctcagacttgtcattgtag
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