Lupinus angustifolius (narrow-leaved blue lupine): 109359456
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Entry
109359456 CDS
T04664
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109359456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109359456
Spliceosome [BR:
lang03041
]
Complex C
Other components
Step II factors
109359456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
109359456
NCBI-ProteinID:
XP_019459674
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All DBs
Position
LG11:complement(18585206..18589250)
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AA seq
582 aa
AA seq
DB search
MDLLHQYQNDDVPDSPLQNPNSPDSSPPRLLPSRSAAPSVDDTMLSLAVNHKSLSNPIDP
TQHAVAFNPTYDQLWSPIVGPAHPYAKDGIAQGMRNHKLGFVEDAAIAPFLFDEQYNTFQ
KFGYAADPSASAFNNYVGDFDALHKNNAVSVYNIPKHEQKRRKIEEKSKQENDENEEEEG
DVGEEMDNPASEAWLLKNKKSPWAGKKEGLQGELSEEQKKYAEEYAKKKGEEKSGFGGEK
GEVVKDQSTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFF
PKYGNLILSASMDTKVKIWDVFNSGKCMRTYMGHSKAVRDICFSNDGTKFLSASYDKNIK
YWDTETGQVISTFSTGKIPYVVKLNPDDDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQH
LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLA
AQSLDNQILIYSTREKFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW
KSCKVFRTLKCHEGVCIGSQWHPLEQSKVATCGWDGLIKYWD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccaccaatatcaaaacgacgacgttcctgactcccctctccaaaaccct
aactcaccggactcctcccctccccgccttctcccttcccgctccgccgccccctccgtc
gacgacaccatgctctccctcgccgttaaccataaatccctctctaaccccatcgacccc
actcaacacgccgtcgcattcaaccctacctacgaccagctctggtcccctatcgtcggc
cccgcccacccttacgccaaggacggcatcgctcagggcatgcgcaaccacaagctcggt
ttcgtcgaagacgccgccatcgcacccttcctattcgacgaacagtacaacactttccag
aaattcggttatgctgctgacccctctgcttccgctttcaacaattatgtcggcgatttc
gatgccttacacaaaaacaacgctgtctcggtttacaatataccaaaacacgagcagaag
aggcgaaaaatcgaggagaagtcgaagcaggaaaatgatgagaatgaggaggaggagggt
gatgttggagaagaaatggataacccggcttcagaagcgtggttattgaagaacaagaag
agtccttgggctgggaagaaagaaggattgcaaggtgaattgagtgaggaacagaagaaa
tacgccgaagaatatgcgaagaagaagggagaagagaagagtggatttggaggtgaaaag
ggtgaggttgttaaggatcagagtacttttcatgggaaggaagaaagggattatcaaggt
aggtcttggattgcgccgccgaaagatgcaaaagcgagtaatgatcattgttatatacct
aagagattggttcatacatggagtggacatactaagggtgtttccgcaattcgatttttc
cctaagtatgggaatttgattctgtcagcaagcatggataccaaagtgaagatttgggat
gtttttaactcgggcaagtgtatgaggacttacatggggcactcaaaagcagttagggac
atttgttttagtaatgatgggactaagttcttgagtgcgagttatgataagaatatcaag
tattgggatactgaaactgggcaagtgatatcgactttctcgacagggaagattccttat
gtggtgaagcttaatccggatgatgataagcagaatgtgttgctggctggtatgagtgat
aaaaagattgttcagtgggatatgaatacgggacaaattactcaggagtatgatcaacat
ttaggggctgtgaatacgattacttttgttgataacaacagaagatttgttacttctagt
gatgataagtctttgagggtatgggaattcggtattcctgttgttataaagtatattagt
gagccacacatgcactctatgccggccatttcacttcaccccaactccaattggctcgct
gcgcagagcttagataaccagatacttatttatagtaccagggagaagttccaacttaac
aagaagaagaggtttgctggacatatcgtggctggttatgcatgtcaagtcaatttctca
ccggatggacgctttgttatgtcgggagatggtgagggcaagtgttggttttgggattgg
aagagttgcaaagtgttcagaactctgaagtgtcatgaaggtgtttgcattggttcccag
tggcatcctctagagcagagtaaggtagcaacatgtggctgggatgggttgataaagtac
tgggattag
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