Lupinus angustifolius (narrow-leaved blue lupine): 109359921
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Entry
109359921 CDS
T04664
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109359921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109359921
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109359921
Spliceosome [BR:
lang03041
]
Complex C
Other components
Step II factors
109359921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_22
AAA_19
ABC_tran
Helicase_RecD
cobW
nSTAND3
AAA_16
AAA_30
SLFN-g3_helicase
NPHP3_N
ATPase_2
AAA_29
AAA_23
Sigma54_activat
FtsK_SpoIIIE
T2SSE
PhoH
SRP54
Cas3-like_C_2
NB-ARC
nSTAND1
DAP3
NACHT
G-alpha
Motif
Other DBs
NCBI-GeneID:
109359921
NCBI-ProteinID:
XP_019460163
UniProt:
A0A1J7IH39
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All DBs
Position
LG01:complement(30529000..30545875)
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AA seq
701 aa
AA seq
DB search
MATLPILQHEEKIIQTVNQNPVVVIIGETGSGKSTQLSQILHRHGYSNSGKIAVTQPRRV
AAVSVARRVSQELGVHLGEEVGYAIRFEDRTSHNTRIKYLTDGVLLRESLADPELNDYSV
VILDEAHERSLNTDILMGLMKRLVKVRSSDFKVLITSATLDGNKVSKFFTDCPVLTIPGK
LYPVEILYNKERPSSYLESSLKTALDIHARQPEGDILIFMTGQDDIEKLVSKLEDKVRAL
EEGSCMDAIILPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGY
VKQRQYNPSAGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRVYDDEFLDATVPE
IQRSSLAGCVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITNTG
QKMAELPLEPSLSRTLMEANNYGCISEALTVAAMLSAETALLSAPGRSKIERKRKNPVTN
LPDGSGLGDHIQLLQIYECWDQTDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKMAKG
PLDIRTNGKGEEFRKGYRNLRKALCTGYANQLAERKMHHNGYRILGFQSQVVQVHPSSVL
KADELGKFPDYVVYHELIATPRPYMRNVCSVEMRWVVPIINKLKTLDVYKLSGGVEHVEE
ETERNLPDFPKKDVDIVASGDDRESRIQAARERFLARKGNK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggccactcttccaatactccaacacgaagaaaagatcatacaaaccgttaaccaaaac
cctgttgttgtaatcattggagaaaccggttccggaaagagcacacaactctctcagatt
cttcaccgccacggttactccaattctggcaaaatcgccgtcactcagccccgccgtgtc
gccgccgtatctgtcgctagacgagtttctcaggaacttggggttcatctcggtgaggaa
gtggggtatgcaattcgatttgaggataggacttcacacaacacacgcataaaatacctt
actgatggggtcctcctccgggaaagtctagctgatcctgagctaaatgattattctgta
gtcatattggatgaagctcatgaacgaagtttaaacacggatattttgatggggttgatg
aaacgcttggttaaagttcgttcctctgacttcaaagttttgatcacatcagcgactctt
gatggcaataaagtatcaaagttctttacagattgtcctgtcttgacaattccaggaaag
ctgtacccagttgagatactttataacaaggagcgtccctcaagctatctcgaatcttct
ctgaaaacagctcttgatatacatgctcgtcaaccagaaggggatattttaatattcatg
actggacaggatgatatagagaagttggtatctaagttggaagataaagttcgggctctt
gaggaaggttcctgcatggatgctataatccttcccctacatggttctttgccacctgaa
ttgcaggtgcgtgtatttagtcctccacctccaaattgcagacgaattattgttgcaaca
aacattgctgaaacttctttgactgttgatggtgtagtgtatgtcattgactcagggtat
gtaaagcaaagacagtacaacccatctgctggcatgtattctcttgatgttgttcaaatt
agcaaagtgcaagctaatcagcgcgcaggccgagctggacgaacccgtccagggaaatgc
tatcgtctatatccttcccgagtttacgatgacgagttcttggatgctacagttcctgaa
atacagagatcttctctcgctggctgtgttctttacttgaagtcattggaccttccagat
attgacattctcaaatttgactttcttgatcctccttcatccgagtcattacaagatgcc
ttgaagcaattatacctgatcgatgcaattgatgaaaatggtgcaattacaaatactgga
caaaaaatggctgaacttccgttagaaccatccctctcgagaaccttaatggaggcaaac
aattatggttgcatatccgaggctttgactgttgctgccatgttatcagctgaaactgca
ttgctatcagcaccagggcggagcaagattgagagaaagaggaaaaacccagtaactaat
cttcctgatggttctggcttgggtgaccacattcaattgctgcagatatatgagtgttgg
gatcaaactgattatgacattggttggtgcaaagataatggcttgcaggtgcgagggatg
ttgtttgtccgagatgtgcgtaagcagttatctcagataatgcagaaaatggcgaaagga
ccactggatattaggacaaatgggaaaggagaagagttccggaagggttatcgaaatttg
agaaaagctttatgtacgggctatgctaatcagctggctgaaagaaagatgcatcacaat
ggctatcgaattctgggttttcaatcccaggtagtccaggtgcatccatcatccgtgctg
aaagctgatgaactgggcaagttcccggactatgttgtataccatgagctgattgcaact
ccacggccatacatgagaaatgtgtgttctgttgagatgagatgggttgtacccattatt
aacaagcttaagacactagatgtatacaaattgagtggcggtgttgaacacgttgaggag
gaaactgagagaaatctcccagattttcccaagaaggatgttgacattgttgcatctggt
gatgaccgtgaaagtagaatacaagccgctagagaacgcttccttgctcgcaaaggcaat
aaatga
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