Lupinus angustifolius (narrow-leaved blue lupine): 109360839
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Entry
109360839 CDS
T04664
Name
(RefSeq) zinc finger CCCH domain-containing protein 4-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109360839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109360839
Spliceosome [BR:
lang03041
]
Complex B
Other components
Prp19-related factors
109360839
Complex C
109360839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
zf-CCCH_3
zf-CCCH
RRM_YTH1
RRM_occluded
zf-CCCH_10
zf-CCCH_4
RRM_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
109360839
NCBI-ProteinID:
XP_019461531
UniProt:
A0A1J7GM87
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All DBs
Position
LG11:22188618..22192579
Genome browser
AA seq
484 aa
AA seq
DB search
MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGR
DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAE
EHDRKARAGMDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGAECPYR
HEMPVTGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLEAPEDESIKTLYVGGLDARVT
EQDLRDNFYAHGEIESIKLVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQSAKPDSDGSDQARQQASVAHSGLLPRAVISQQQSQDQNQGMVYYTNPPPQQERSYYPS
MDPQRMGALVSSQEGPPGGPSGSGENIPNMEKQQMQHYPHPMMPPPPGQYHHQYYPPYGY
MPPVPPYQQQYPPPPYNAPMPPSHPPAVSHPYQHSMQPGSSQAGSSQGGSAPAEAGTSSG
SQQQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctcataggttgctgagagatcacgaagccgacggatgggaacgctccgatttcccc
atcatctgcgaatcatgtctcggcgacagtccctatgttcgaatgacaagagcggagtat
gataaggagtgcaaaatttgtacacggccttttactgtttttagatggagacctggtcga
gatgcaagatataagaaaagtgagatctgtcagacatgtagcaaattaaaaaatgtttgt
caagtctgccttcttgatcttgaatatggattaccagttcaagtccgtgatacagctctg
agtattgattctaatgatgccattcccaagagtgatgttaatagggagtatttcgcggag
gagcacgaccggaaggctagagctggtatggattatgaatcctccttcggtaaagcacgc
ccaaatgatactatcctgaagcttcaaaggacaacaccgtattacaaaagaaaccgagca
catgtttgtagtttctacataaggggtgagtgtactagaggagctgagtgcccttatagg
catgagatgccagtgactggggagttgtctcaacaaaatattaaagatcgttattatggg
gtgaatgatccagtggctttaaagctacttggcaaggcaggagagatgccctctctggag
gctcctgaggatgagagcattaaaactctttatgttggtggacttgatgccagagtcact
gagcaagatttgcgggataacttctatgcccatggtgaaattgaatccatcaaactggtt
cttcagcgggcttgcgcatttgtaacctatacaaccagagaaggtgccgaaaaggcagca
gaagaactctcaaacaaactggttattaagggcctaaggctaaagctaatgtggggcagg
ccccagtcggcaaaacctgactcagatggctctgatcaagcgaggcagcaggcatctgtg
gctcatagtgggttattgcctcgagcagttatatcacagcagcagagccaggaccagaac
caaggaatggtttactataccaatccacctcctcaacaggaaagaagttattacccatca
atggatcctcaaagaatgggtgctcttgtttcatcccaagagggtcctcctgggggacct
tccgggtcaggggagaacatacccaatatggagaagcagcaaatgcaacattatccccat
ccaatgatgcctccaccaccaggccaatatcatcatcagtattatcctccatatggctat
atgccaccagttcccccttatcaacaacagtacccaccaccaccgtacaatgctccaatg
cctccgtcgcatccaccagctgtaagtcatccttatcagcattctatgcagccagggtct
tcacaagcaggatctagtcagggtggctctgctccggccgaagccggaacatcatcaggg
tcacagcagcagtga
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integrated database retrieval system
