Lupinus angustifolius (narrow-leaved blue lupine): 109361066
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Entry
109361066 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109361066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109361066
03036 Chromosome and associated proteins [BR:
lang03036
]
109361066
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109361066
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109361066
mRNA degradation factors
5'-3' decay
Decapping complex
109361066
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109361066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Mdt30
TFIIA
Motif
Other DBs
NCBI-GeneID:
109361066
NCBI-ProteinID:
XP_019461914
UniProt:
A0A1J7HI63
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All DBs
Position
LG11:complement(9468065..9474308)
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AA seq
508 aa
AA seq
DB search
MNNSNNNRARYPPGIGYGRGGGGGGDGGGFNPNHNQNAPFQPRPSYQQQQQQHQHQQHYA
QRNLVPQQQQQQQQWLRRAQLGAGGSESNVVDEVEKTVQTEASDSSSQDWKARLKAPPPD
TRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN
GTGKTAAFCIPALEKIDQDTNVIQAVILVPTRELALQTSQVCKELGKHLKIEVMVTTGGT
SLRDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCTMLVMDEADKLLSPEFQPSIQQL
IQFLPSNRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKVH
CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG
ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR
FNLYRIEQELGTEIKQIPPFIDQAVYCR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagtaacaacaacagagcgagatatccgcccggtatcgggtacggacgcggt
ggtggtggtggtggtgacggaggagggttcaaccctaatcataaccaaaacgcaccgttt
caaccaaggccctcttatcaacaacaacaacaacagcaccagcatcagcaacactatgcg
cagaggaatttggttccgcaacaacagcagcagcagcaacaatggttgagaagggcgcaa
ttgggtgctggcggttctgaatcgaacgttgttgacgaggtcgaaaagactgtccagact
gaagccagtgattcaagttcacaagattggaaggcaagactaaaggctccaccacctgat
acacgctataagacagaggatgtgacagcaactaaaggaaatgaatttgaggattacttt
ttgaagcgagagctgctcatgggaatatatgagaagggttttgaaaggccttctcctatc
caagaagaaagtattccaattgctcttactggtagtgacattcttgctagagcaaaaaat
ggaacaggcaaaacagccgcattttgcattcctgcattggaaaaaattgaccaggatact
aatgttattcaagctgttatactggtccctactcgagagttggctttgcaaacatctcaa
gtgtgcaaagagcttgggaagcatttgaaaattgaagttatggtcacaacaggtggtacc
agcttgagagatgatattatgcgcttatatcaaccagttcatttactagttggaactcca
ggaagaatattagatctcactaagaagggtgtttgtgttctgaaagattgcactatgctt
gttatggatgaggctgataaacttttgtccccggagttccaaccttctatacagcagctg
attcaatttcttccttcaaaccgtcaaattctaatgttttcagcaacatttcctgttact
gtaaaggacttcaaagatagatatcttcaaaaaccatatgtcattaaccttatggatgag
ctaactctgaagggtattacacaattctatgcatttgtggaagagaggcagaaagtccat
tgcctgaatacactattttctaagttgcaaataaaccagtcgatcatcttctgcaattca
gtgaatcgggttgaacttcttgccaagaaaatcacagaacttggttattcgtgtttctat
attcatgcaaagatgttgcaagatcatcgtaatagagtatttcatgacttccgtaatggt
gcatgcagaaatcttgtctgtactgatctttttactaggggaatagacatccaagcagtt
aatgttgttattaatttcgactttcccaagaactcggaaacttatttgcacagggttggc
cgttcagggaggtttgggcaccttggtttagcagtgaacctgatcacttatgaggatcgc
tttaacttatataggattgaacaagaacttggcactgaaataaagcaaattccaccattc
attgatcaggcagtttattgccggtga
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