Luteibacter anthropi: KR767_00525
Help
Entry
KR767_00525 CDS
T08319
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lanh
Luteibacter anthropi
Pathway
lanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KR767_00525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lanh03019
]
KR767_00525
03009 Ribosome biogenesis [BR:
lanh03009
]
KR767_00525
Enzymes [BR:
lanh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KR767_00525
Messenger RNA biogenesis [BR:
lanh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KR767_00525
Ribosome biogenesis [BR:
lanh03009
]
Prokaryotic type
rRNA processing factors
KR767_00525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
URX62611
LinkDB
All DBs
Position
108325..112092
Genome browser
AA seq
1255 aa
AA seq
DB search
MKRMLINATQREELRVAIVDGQNLYDLDIEIPSREQKKANIYKGRITRVEPSLEACFVDY
GAERHGFLPLKEIAREYFNPNAEGKSNIRELLKEGQEIIVQVEKEERGNKGAALTTFISL
AGRYMVLMPNNPRAGGVSRRIEGEDRQALKEAMEHLNVPDEMGLIVRTAGMGRDAEELQW
DLDYLLQLWKSISAAANSQKAPFLIYQESKLFIRALRDYLRNDIGEILIDEESLFKDARD
FVQQVMPNNLRKLKLYQDPTPLFSRYQIETQIESIFERNVRLPSGGSIVIDQTEALTAID
INSSKATKGSDIEETAFNTNLEAATEIARQLRIRDAGGLIVIDFIDMDSPRHQREVEERL
KDALKADRARVQIGRISRFGLLEMSRQRLRPSLGEATQIVCPRCEGHGHIRSVESLALST
LRLIEEHAMKENTGQVLVQAPPSVANFLLNEKRASIVEIELRHSVHVVVVADDKLETPHL
EITRIREADMGEHSKPSYERTTPVLATPLPKMGQMLGSGEQPLVTGVVPASPAPIRDETP
EATPVAQPARQPAAAAKPSGGFFSRLFGALFGGGSAQPAPAAQPATSPRRDESRPGGRNE
RNGRRDERRGEGRGKSGDPQRQGPRNKDNAPQGKGQQQAKGNKAQGQPQGKGQQAEDKNR
QKDTQPSQGRQGGRNEQDKNPQQAGNENRRQQQPRGERVPQADKAEKVTEKADKAAAPAQ
PVQPRAEKAPAQAPVVDEKLLVAGAAAATVAATAAEATAATAATAATSEVENTESVAADG
TKEAGEGGQRRRRGRRGGRRRRRQEDGAQGASVDGAAGADDLDDEEGEDNSPVTARDSDS
VPPVFDTAEAATHAFKVEAPKTEATRPAVESTDDDDKVPSALTLPSLPKLPPIPGSTAAA
QVTSVAISSEPVATPAESADLRTTERRQTESNAPLKNESPAPAVAAPVETTVPAAPAVVE
AKAEETKPVVAAPAPTPVQEQPEPTSELDAPARGLLPEASEPSKAVEPVIATAPVAAAEK
AEVATPHASTAEQSQAAPAAPAPVVARDAEKPATVEVAKTEVTEVQAPTADVKASVAPTA
PAQEAPTTDAPKVSVQDAPAADVQKASEHGAPVEEASTAHATEAPNTQAPVAPAPEAPKA
HAQEAQVTQTPVVETPAAPVKQVASEKAADEAGHVEDESAKPVAAAPAASPEESASATAP
VTPKSPEASNVSHVSHTPASSSEKSGWTPPTQGDLLTRPRHESHGGDSSPRDAQS
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatgttgatcaacgcgactcagcgcgaagagttgcgcgtggccatcgtcgac
ggacagaacctctacgatctcgacatcgagatcccgtcccgcgaacagaaaaaagccaac
atctacaagggccgcatcacccgcgtcgagccctccctcgaagcctgcttcgtcgactac
ggcgccgagcgccacggcttccttcccctgaaggaaatcgcccgggaatacttcaatccc
aacgcggaaggtaaatccaacatccgcgaactcctgaaggaaggccaggagatcatcgtc
caggtcgagaaggaagaacgcggcaacaagggtgccgcgctcaccaccttcatcagcctg
gccggccgctacatggtgctgatgcccaacaacccccgtgccggcggcgtatcgcgccgt
atcgagggtgaggatcgccaggccctcaaggaggccatggagcacctcaacgtgcccgac
gaaatgggcctcatcgtgcgcaccgccggcatgggccgcgacgccgaagagctccagtgg
gatctcgactacctgctgcagctgtggaagtcgatctcggccgccgccaactcgcagaaa
gcgccgttcctgatctaccaggaatccaagctcttcatccgcgccctgcgcgactacctg
cgcaacgacatcggcgaaatcctcatcgacgaagagtcgctgttcaaggacgcccgcgat
ttcgtccagcaggtgatgccgaacaacctgcgcaagctcaagctctaccaggatcccacg
ccgctcttctcgcgctaccagatcgaaacccagatcgagagcatcttcgagcgcaatgtg
cgcctgccctcgggcggttcgatcgtgatcgaccagaccgaagccctcaccgccatcgac
atcaactcgtcgaaggccaccaagggcagcgacatcgaggaaacggcgttcaacaccaac
ctcgaagccgccaccgagatcgcccgccagctgcgcatccgcgatgccggcggcctgatc
gtcatcgacttcatcgacatggacagcccgcgccaccagcgcgaggttgaggagcgcctg
aaggacgccctcaaggccgaccgtgcccgcgtccagatcggtcgcatctcgcgcttcggc
ctgctggagatgtcgcgccagcgcctgcgcccgagcctcggcgaagccacccagatcgtc
tgcccccgctgcgaaggccacggccatatccgcagcgtggagtccctggcgctgtccacc
ctgcgcctgatcgaagaacacgccatgaaggaaaacaccgggcaggtcctggtgcaggca
ccgccgtcggtcgccaacttcctgctcaacgaaaagcgcgccagcatcgtcgagatcgaa
ctgcgccacagcgtgcacgtggtcgtggtcgccgacgacaagctggaaaccccgcatctg
gaaatcacccgtatccgcgaggcggacatgggcgaacacagcaagccgagctacgagcgc
accacccccgtgctcgccacgccgctgccgaagatgggccagatgctgggcagtggcgaa
cagccgctggtgaccggcgtcgtgccggcctctccggcccctatccgtgatgaaacgccg
gaagccacgcccgtggcgcagccagcccgtcagccggccgctgcggccaagcccagcggc
ggcttcttctcccgcctgttcggcgccctgttcggtggcggttccgcccagccggcaccg
gccgcccagccggctaccagcccccgccgcgacgaatcgcgcccgggtggccgcaacgag
cgcaacggtcgtcgcgacgagcgtcgtggcgaaggccgtggcaagagcggcgatccgcag
cgccagggtccgcgcaacaaggacaacgccccgcagggcaagggccagcagcaggccaag
ggcaacaaggcccagggtcagccgcagggcaagggccagcaggccgaagacaagaatcgc
cagaaggacacccagccgtcgcagggccgccagggcggacgtaacgagcaggacaagaac
ccgcagcaggccggcaacgagaatcgccgccagcagcagccgcgcggcgagcgcgtgccg
caggcagacaaggccgagaaggtgacggagaaggccgataaggccgccgcacccgcccag
ccggtccagccgcgcgccgagaaggcgccggcgcaggccccggtggtggacgaaaagctg
ctcgtcgccggcgcggccgccgctacggtggccgccacggccgccgaggccacggcagcc
actgcagccactgcagccaccagcgaagtggagaacaccgagtccgtcgcagccgatggc
acgaaggaagccggtgaaggcggtcagcgccgtcgtcgcggtcgtcgcggcggtcgccgc
cgtcgtcgccaggaagacggtgcgcagggtgccagcgtcgatggtgccgcgggcgccgac
gatctcgatgacgaagagggtgaggacaactcgccggtcactgcccgtgacagcgacagc
gttccgccggtcttcgacaccgcggaagctgcaacccatgccttcaaggtagaggctccg
aagaccgaagccacccgccccgccgtcgaatcgaccgatgacgacgacaaggtaccgtcg
gccctcaccctgccttcgctgccgaagctgccgcccattccgggcagcaccgccgcggcg
caggtcacgtctgtcgccatctcgtccgagcccgtggccacgccggcggaatccgccgac
ctgcgcacgaccgaacgtcgccagaccgaatcgaacgccccactgaagaacgagtccccg
gcgccggctgttgccgcgcctgtggaaacgaccgttccggccgccccggcggttgtcgaa
gcgaaggcagaggaaacgaagcccgtcgtagcggcacctgccccgacgcccgtccaggag
cagccggagccgacgtccgaactcgacgccccggcccgcggtctcctgccggaagcctcc
gagccctcgaaggctgtcgagccagtgatcgccaccgcacccgtggccgccgccgagaag
gctgaagtagcgacgccgcacgcttctaccgcggagcagagccaggccgccccggctgcg
cccgcaccggtcgtggcccgtgatgctgaaaagcccgcaacggtggaagttgcaaagacc
gaggtgacggaggtccaggctccgacggcagacgtcaaggcatcggttgctccgacggct
cctgcgcaggaagccccgacgacagacgctccgaaggtctcggtacaggacgctccggcc
gccgacgtccagaaggcttccgaacatggcgccccggttgaggaagcctccacggctcac
gctacggaagcacccaacacccaggcaccggtcgcgccagcccctgaagctccgaaggct
cacgcacaggaagctcaggtaacccaaacgcctgtcgtggaaaccccggctgccccagtc
aagcaggtcgcctccgaaaaggctgccgatgaggcaggccatgtggaagacgaatccgcg
aagcctgtcgctgccgccccggccgcatcccctgaagagtcggcatcggctacggccccg
gtaacaccgaagtcgcccgaagcgtcgaacgtgtcgcacgtatcccacacgccggcatct
tcgtcggagaagtcgggatggacgccgcctactcagggcgacctgctgacccgtccgcgc
catgagtcgcacggtggggattcgtcgccgcgggatgcccagtcgtaa
DBGET
integrated database retrieval system
