Luteibacter anthropi: KR767_02635
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Entry
KR767_02635 CDS
T08319
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
lanh
Luteibacter anthropi
Pathway
lanh02020
Two-component system
lanh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lanh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KR767_02635
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KR767_02635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lanh03021
]
KR767_02635
Transcription machinery [BR:
lanh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KR767_02635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_31
Relaxase_C
HTH_38
Motif
Other DBs
NCBI-ProteinID:
URX62986
LinkDB
All DBs
Position
572243..573727
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AA seq
494 aa
AA seq
DB search
MKPGLQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAEGNPLLEFAEDAEPEAEAT
VEEGFQANDFSVRDDTSSKSTKEVDSAAPPSDEHTPEWGDDDRFHGEGGDYAGAPSRASG
SGDDDGFEPQNAAPESLQQHLAWQLNLSQFTPRDHAIATAIIHALDEDGYLRDGVDAVHA
ALPAELGATAQEIEAVRQRVQRFDPTGIASLDLRDCLFCQLSQFADDTPHRDLAMRIVND
ELELLARNDIPKIARKFKAPEDEVAAAAALIRTLDPRPGAALDATPVEYVAPDVYARREN
GRWQVSLNPDAQPRLGLNQHYCGLIARARGDDATWMKGQLQEARWLLKSLQSRAETLTKV
AEAIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHFF
SSGVATEDGGSASATAIQAMLRKLIGGEDPRKPLSDQALAEELHGRGIQVARRTVAKYRE
ALRIPSSSERVRAG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggacttcagtttcgcctccatcagcagctgacgctgaccccgcagttgcaa
caggccatccgcctgctgcaactgtcgcagcttgagctcgaggccgaactccgccagatc
gcggaaggcaaccccctgctcgagttcgccgaagacgccgaacccgaagcggaagccacc
gtcgaggaaggtttccaggccaacgatttcagcgtgcgcgacgacacctcgtccaagtcg
acgaaagaagtcgactccgccgcaccaccttccgacgaacacacgcccgaatggggcgac
gacgatcgtttccatggtgaaggcggcgactacgccggcgcgccttcgcgtgcctccggc
agtggcgacgacgacggtttcgaaccgcagaacgccgcaccggaaagccttcagcaacac
ctggcgtggcagctcaatctgtcgcagttcacaccgcgcgatcacgcgatcgccacggca
atcatccacgcgctcgacgaagacggctacctgcgcgacggtgtggatgccgtgcatgcg
gcgttgcctgccgagttaggtgccaccgcacaggaaatcgaagcagtacgccagcgcgtg
cagcgtttcgatcccaccggcatcgccagcctcgatcttcgcgactgcctgttctgtcag
ctttcgcagttcgccgacgacacgccgcatcgcgatctcgccatgcgcatcgtcaacgac
gaactggaactgctcgcacgcaacgacatcccgaagatcgcgcgcaagttcaaggcgcca
gaagacgaagtagccgccgcagcagcacttatccgcacgctcgatccacgccccggtgcg
gcgctggatgccacgcccgtggaatacgtggcacccgatgtctacgcacgacgcgagaac
ggtcgctggcaggtcagcctcaatcccgacgcgcaaccgcgcctgggtctcaaccagcat
tactgcggtctcatcgcccgtgcacgcggcgacgatgccacatggatgaagggccagttg
caggaagcgcgctggttgctgaagagcctgcaatcacgcgccgaaacgctgaccaaggtg
gccgaagccatcgttcgccggcagagtgccttcctcgattacggcccggaagccatgcac
ccgctggtgctgcgcgaagtggccgaggaagtaggcatgcacgagtccaccatctcgcgc
gtcaccacgcgcaagtacatgcacacaccgcgtggcacgttcgaactgaaacacttcttc
tccagcggcgtggccacggaggatggcggcagcgcgtccgccacggccatccaggcgatg
ctgcgcaaactcatcggtggggaggacccacgcaaaccgttgtccgaccaggcgctcgcc
gaagagcttcacggtcgcggtatccaggtggcccggcgtacggtcgccaaataccgtgaa
gcacttcgcatacccagttcaagcgaacgcgtgcgcgcgggttga
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