Ligilactobacillus animalis: FAX13_00815
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Entry
FAX13_00815 CDS
T06852
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani00521
Streptomycin biosynthesis
lani00523
Polyketide sugar unit biosynthesis
lani00541
Biosynthesis of various nucleotide sugars
lani01100
Metabolic pathways
lani01110
Biosynthesis of secondary metabolites
lani01250
Biosynthesis of nucleotide sugars
Module
lani_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FAX13_00815 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FAX13_00815 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FAX13_00815 (rfbC)
Enzymes [BR:
lani01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FAX13_00815 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCQ03246
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Position
188848..189417
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AA seq
189 aa
AA seq
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MVKVIDTKLQDAKIIETDVFGDHRGFFTETYTKQKFVEAGIDFDFTQDNQSLSVEPGVLR
GLHYQRAPYAQTKLLRAVTGVIYDVIVDIRKGSPTYGQWQGFILSEYNHRQLLVPKGFAH
GFVTLTPNVNVAYKVDGYYNPEADGGIAFDDPDLGIDWPMPIEHLILSDKDKKHPRLKDA
DLNFTYGKD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttattgatacaaagttacaagatgctaagatcatcgagaccgatgttttt
ggtgatcatcgtggttttttcacggaaacatacacaaagcaaaaatttgtcgaagcaggg
atcgattttgatttcacccaagacaaccaatcactttcagttgaaccaggtgtcttaaga
ggcttgcattatcaacgtgcaccttatgctcaaactaaattgttacgggccgttacaggt
gttatctatgatgtgatcgttgatattcgtaagggttcacctacatatggtcaatggcaa
ggttttatcttaagtgagtacaaccaccgccaattattagtgccaaagggttttgcgcat
ggttttgtgaccttgaccccaaatgtgaatgtagcttacaaagttgatggctactacaat
ccagaagctgatggtgggatcgcattcgatgatccagatctagggatcgactggccaatg
ccgatcgaacatctgatcttatcggataaagacaaaaaacatccacgtttaaaagatgct
gatctaaactttacttacggaaaggactaa
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