Ligilactobacillus animalis: FAX13_02185
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Entry
FAX13_02185 CDS
T06852
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lani
Ligilactobacillus animalis
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_02185 (addA)
Enzymes [BR:
lani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAX13_02185 (addA)
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FAX13_02185 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
DUF2059
AAA_30
AAA_12
ssDNA_DBD
Flavi_DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QCQ03487
LinkDB
All DBs
Position
496421..500164
Genome browser
AA seq
1247 aa
AA seq
DB search
MAEIKFTPGQLQAINDEGKNILVAASAGSGKTRVLVERVIRKIKEKTAVDEMLILTFTEA
AAREMKERIQGALRQAINAEADPETKRFYLQQLTKLNVADISTIDAFCLRMVQKYYYLAQ
IDPDFRLLTDETERALLRESVWEDLREELYGKLDPLFEQLTLNFSNDRSDDGLTELVMEL
FDFANVNPDPKAWLENLAKNYHLEAGNLEQSGFYRNEFMPYVAEQLQKFADYMGQAAQIL
EEIDDPEDKLAKLKALYHTEEQALCKLAELDLSTISYNELKVTLEAVEFKRAPAARLDDE
QKVLKNQAQALRDETKKQLSELLSNYFNAQESEVIELFTQAEILAKKAAEVVLRFMRRYQ
AEKKRRHVLEFSDLEHLTLKILRQQEDTSVKELLQARYQEIMVDEYQDTNQLQEAILTTL
AQDNMFMVGDVKQSIYAFRLADPTLFLGKYHRFGRSNDPNERIILAENFRSAENITATTN
FIFSQIMDQKIGEMDYDKNAQLVYGAKDYPEMSLPTEILLYTSEEDPLNDPAKKPLKMRW
DQEPEAMGPDFEINSNQEGQIALVAKKIKELHDEKFEIYDREAGQMRPITYGDIAILSET
RTNHLLLSEELKRLEIPFYVQKSQNYFQTTELRIMLALLALIDNPYQDIELAAVLRSPIV
GLKENELAYLRINDKSGDYFHALEKFYQDPSNQGKEPFVQALYAKIARFMEQLQGFRDLA
HQNELATLILAIYEQTGFLDYVGGMPGGPQRQANLHALYERAAMYEQSSFKGLFQFIGFI
KKMQEKQDDLSEAVLKTSDDTVNIMTIHGSKGLEFPIVFLIDAAKKFNMRSLDKKYILSE
KAGLAMNYLDQERRIEHETLVKNLAKQTARNKSAAEKMRLLYVALTRAKEKLFIVAGYDS
REQVEKLVEKAQTSELLLPDDVRANAKNFMDWILPAVARRENIAQAFDLLVQPHPALDEM
PAEFALDFANYNDIADEQRLAQVDLTKWFDEQTTAQTKLTPEMITKIDQILAGKYQHEAA
TRTAAYQAVSDIKRLFDDPDLEKMAKITPETTANREVGDFRKPRFMTEEVQVTPAAIGTA
VHLLFQELDLTQIPTITTVNALLQRLIADGLITPEVAKQIDIAKLVAFYVTPLGQELLKN
HTRAKREVAFSMVLPAGKVFEELDETLTDPILVHGIMDGYFITENDEVVLFDYKTDRIYG
EDGVEKIMQRYQGQLNLYQTALEQILNKPVTHKYLYLVELDQAVELP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatcaaatttacacctggtcagctccaggcgatcaacgatgaaggcaaaaac
attttggttgctgcttcagccggctcagggaagacccgggtgttggtcgaacgtgttatc
agaaagatcaaagagaaaactgcagtagatgagatgttgatcttgacctttactgaagca
gccgcgcgggaaatgaaagaacggatccaaggcgctttgcgacaagcgatcaatgctgaa
gctgaccctgagactaagcggttttacttgcaacaactgacaaaactcaatgtggctgat
atcagtacgatcgatgcattttgtttgcgcatggtccaaaaatattactatttagctcag
atcgatcccgattttcgcttgttgaccgatgaaacagagcgggctttactgcgcgaaagt
gtttgggaagatctgcgggaagaactttatggtaagttagatcccttgttcgaacagctg
accttgaacttttctaatgaccgcagtgatgatggcttgactgaacttgtgatggagtta
tttgattttgcaaatgtcaatcctgatcccaaagcttggcttgaaaatttggctaaaaat
tatcatttggaagcgggaaatttagaacaaagcggattttatcgcaatgaattcatgccg
tacgtcgctgagcaattgcaaaaatttgccgactatatggggcaagccgcgcagatctta
gaggagatcgatgatccagaagataagttagcaaaattaaaggctctttatcacacagaa
gaacaagcgttgtgtaaattagctgagcttgatctgtcaacgatctcgtataacgagcta
aaagtgactttagaggcggtcgaattcaagcgtgcgcctgcagcccgcttggatgatgag
caaaaagtgctaaaaaatcaggctcaagctctgcgcgatgagacgaaaaaacagttgagc
gaacttttgagtaattattttaatgcccaagaaagtgaagtcattgagctatttacgcaa
gctgagatcttggctaaaaaggcagctgaagttgtcttacgcttcatgcgccgctatcaa
gcagagaaaaaacgccgccatgtcttggaatttagtgatctagaacatctgactttaaag
atcttgcgccaacaagaagacacgagtgtcaaagaactcttgcaagcgcgctaccaagag
atcatggtcgatgagtatcaagatactaatcagctgcaagaagcgatcttgacgactttg
gcgcaggataatatgttcatggtaggggatgtcaagcagtcgatctatgcgtttcgtttg
gctgatccgacactatttttaggtaaatatcatagatttggtcgctcaaatgatccaaat
gaacggatcatcttggctgagaattttcgctcagctgaaaatatcacggcaacgacgaac
tttatcttttcacagatcatggatcaaaagatcggggaaatggattatgacaaaaatgcg
cagttagtttatggcgctaaggattatccggaaatgtcgctaccgaccgagatcttgtta
tatacctcggaagaagatcctctaaatgatccagctaaaaagccattaaaaatgcgctgg
gatcaagaacccgaagcgatggggcctgattttgagatcaattccaatcaggaaggtcag
atcgctttagtggctaagaagatcaaagaattgcatgatgaaaagtttgagatctatgac
cgtgaagcaggccagatgcgtccgatcacatacggcgatattgcgatcttatcagagaca
cggaccaatcatctattgttatctgaagagttgaagcgtttagagatcccattttatgtg
caaaagtcccaaaattattttcaaacgacggaattgcggatcatgttggcacttttagct
ttgatcgacaatccttaccaagatatcgagcttgctgcggtcttacgttcaccgatcgta
gggctaaaggaaaatgagttggcttatctgcggatcaatgataagagcggtgattatttc
cacgccttagaaaaattctatcaagatccaagcaatcaagggaaagagccgtttgtccaa
gcgctctatgctaagatcgcacgctttatggagcaattgcaaggctttagagatctggcg
caccaaaatgaattagccactctgatcctagcgatctatgagcagacgggctttttggat
tatgtcggcggaatgcctgggggacctcagcgccaagctaatctgcatgcactttatgaa
agagccgcgatgtatgaacagagcagcttcaaagggctatttcagttcattggttttatc
aaaaagatgcaagaaaaacaagatgatctctccgaggcggtcttaaagacaagtgatgac
acggtcaatatcatgacgatccacggtagtaaggggctggaatttccgatcgtatttttg
atcgatgcggctaaaaaattcaatatgcgttcactggataaaaaatatattttaagtgaa
aaagctggtctagcgatgaattacttagatcaagagcgccggatcgaacatgagacttta
gtcaaaaatcttgctaaacaaaccgctagaaataagagcgccgctgaaaagatgcgcttg
ttatatgttgcgttgacccgggccaaagaaaaactctttatcgtggcaggttatgattca
cgagaacaagtggaaaaactggtcgaaaaggctcaaacttctgaattgttattgccagat
gatgtccgcgccaatgccaaaaatttcatggattggatcttgcccgcggtcgcacggcgg
gaaaacattgcccaagcatttgatctcttagtgcaaccacacccagctttagacgagatg
ccagccgaatttgcattggattttgctaattacaacgatattgcggatgaacaacggtta
gcgcaagtagatctaactaagtggtttgatgagcaaaccacagcccaaaccaaacttacc
cctgagatgataactaagatcgatcagatcctagcaggtaagtatcaacatgaagcggca
actaggaccgctgcctatcaagctgtttcggatatcaagcgtttgtttgatgatcctgac
cttgagaaaatggcaaagatcacgccagagacaacggctaatcgtgaagtcggtgatttt
agaaaaccgcgctttatgacagaagaagttcaagtgacgccagctgccatcgggacggct
gttcacttgctcttccaagaattggatctgactcagatcccaacgatcacaacggtcaat
gctttattgcaacgtttgatcgctgatggcttgatcacacctgaagtcgctaaacagatc
gatatcgctaagcttgtagccttttatgtaacaccgttaggccaagaactcttaaaaaat
catacgcgagccaagcgcgaagtagccttttcgatggtcttgccagcgggtaaagtcttt
gaggagttagatgagaccttgaccgatccgatcttagtccacgggatcatggatggttat
tttattaccgaaaatgatgaggtcgttttatttgattacaagaccgaccgtatttatggt
gaagatggggtcgaaaagatcatgcaacgctatcaagggcagttgaatttatatcaaacg
gctttggaacagatcttaaataaacctgtgacccataaatatctttatttagttgaactt
gatcaagctgttgaattaccgtga
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