Ligilactobacillus animalis: FAX13_03100
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Entry
FAX13_03100 CDS
T06852
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FAX13_03100 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_03100 (ruvB)
Enzymes [BR:
lani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAX13_03100 (ruvB)
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAX13_03100 (ruvB)
RecFOR pathway proteins
FAX13_03100 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
Sigma54_activat
RNA_helicase
NB-ARC
AAA_22
AAA_14
nSTAND3
AAA_3
MCM
Sigma54_activ_2
NTPase_1
AAA_24
Bac_DnaA
NPHP3_N
TsaE
DUF815
Rad17
AAA_17
AAA_25
AAA_18
AAA_PrkA
IstB_IS21
ABC_tran
AAA_28
NACHT
ATPase_2
AAA_19
AAA_33
AAA_11
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QCQ03624
LinkDB
All DBs
Position
663999..665006
Genome browser
AA seq
335 aa
AA seq
DB search
MEDERLISNAAFDQNDEQTELSLRPQKLAQYIGQEKIKQKVAIYIEAAKSRQESLDHVLL
YGPPGLGKTTLATIIANELEVKIKTTTGPAIERPGDLVALLNELEPGDVLFIDEIHRMPK
SIEEMLYSAMEDFYIDIIVGQDATAHPVRFPLPPFTLIGATTKAGMLSAPLRARFGIVEH
MNYYTDAELAQIVTRSASVFSTAISEQGALEISRRSRGTPRVANRLLKRVRDFAQVAAKD
QIDLEIVKFALEMLHVDDRGLDETDHKVLRTMIELYGGGPVGLNTLAANIGEDTETIADM
IEPYLLQIGFIKRTARGRVVTPLAYEHLHLPYNKN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgagcgtctgatctcaaatgcggcttttgatcaaaacgatgagcaaacagaa
ttgagtctacgtccgcaaaaattagcgcaatatattggccaagaaaagatcaagcaaaaa
gtggcgatctatatcgaagccgctaaaagtcgccaagagtcactcgatcatgtcttgctc
tatggaccacctggtttaggtaagacgacattagcgacgatcattgctaatgagttggaa
gttaagatcaagacgacgacagggccggctattgagcgaccaggtgatctagtggcgcta
ttaaatgagcttgaaccaggcgatgtattatttatcgatgagatccaccggatgccaaag
agcattgaagagatgctttattcggcgatggaagatttttatatcgatatcatcgttggc
caagatgcgaccgctcatccagtcagattcccgttgccaccgtttactttgatcggagct
acgactaaggccggcatgttgtcggcacctttgcgcgcgcgttttgggatcgtcgagcat
atgaactactacactgatgctgaactagcacagatcgttacccggtctgcaagtgttttt
tcaactgcgatcagcgagcaaggcgccttggagatctcgcgccgttcgcgggggactcca
cgtgtggctaaccgcttattaaagcgtgtacgtgattttgcacaagtagcagccaaagat
cagatcgaccttgagatcgtgaaatttgctttggagatgctacatgttgatgatcggggc
ttagatgagaccgatcataaagttttaagaacaatgatcgaattatacggcggtggacca
gtgggcttgaacactttagctgccaatatcggtgaagatacggaaacgatcgccgatatg
atcgaaccttatctcttacagatagggtttatcaagcgaactgctcgggggcgtgtggtg
accccgttggcatatgagcatttacacctaccatataacaaaaattaa
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