Ligilactobacillus animalis: FAX13_03980
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Entry
FAX13_03980 CDS
T06852
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FAX13_03980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_03980
Enzymes [BR:
lani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FAX13_03980
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAX13_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
UvrD_C
CHASE3
UvrD-helicase
AAA_12
AAA_22
HTH_IclR
AAA
nSTAND3
HHH_5
AAA_16
DEAD
SLFN-g3_helicase
AAA_28
RuvB_C
Mg_chelatase
AAA_29
NPHP3_N
PCP
Helicase_RecD
TsaE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QCQ03791
LinkDB
All DBs
Position
841209..843602
Genome browser
AA seq
797 aa
AA seq
DB search
MQQETLTLFDEDKNEGYLVAEVLNIFFEAPASLYKVALVGITETDLDLDSEVTITGNFPE
LVEGTSYYFKGKITEHPKYGRQVQVLSYKPEILSSKDGVIAYLAGDHFEGIGKKTAEKIV
SQLGENAVDKLLNDPTVADELGLSAKQKENLLAGITADNGAEHTLIGLSTLGFSEKMAGK
LFEKYREKTLDVVHENPYQLVYDIEGFGFNRADQLALKLGVAATAEVRLAAAIFESMAQL
SLYLGNTYTDGPTLLKEALRLLEQSRPEKIEPELLADQLLKMGEKGQVISDDGRIYLRRY
YEAEYTIAEELKRLATKTSEQEVSDTQIDDFIQAIQKDLQITYGPDQKAAIKAAVKAPVF
LLTGGPGTGKTTIIMGIVRTFAALHELDLSDTSQTPILLAAPTGRAAKKMSEATGLPAST
IHRLLGLNGREDELPEETKALEGQLLIVDETSMVDTVLLQLLLESIPEQMQVIFVGDRNQ
LPSVGPGQVFSDLLASETLPQKELAKIYRQGDGSTIIKLAHAVKDGIVPPDLMQKTNDRS
FIPCHADQVSSVVEQVVAAALAKQNKGDDVQILAPMYRGAAGITNLNQTLQALLNPRKPQ
QKEIKFGNNVFRIGDRVLHLVNDPENNIFNGDIGKIVGIELKKDRPKEDKVIISFDGQEV
EFGRKDLINLTLAYCMSIHKSQGSEFPIVILPMVQQYSRMFARNLLYTALTRAKEKLILL
GEPEAYAKCIQTVALNRKTTLTTRLWEVLGKPKSSDTKEAIKAGSAPKFILTPALVKTGE
IDPMIGMDNLTPADFMR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagagacactgacactatttgatgaggataaaaatgaagggtatttagtcgcc
gaagttctaaatatcttttttgaagcaccagcaagtttgtataaagtagcgcttgtgggc
atcaccgagaccgatcttgatctagacagtgaagtgacgatcacaggaaattttcccgag
ctcgttgagggaacaagttactattttaagggaaagatcaccgaacaccctaaatatggc
cgtcaagttcaagtgctcagctataagccagagatcttgtcttcaaaagatggtgtgatc
gcatatttagctggtgatcattttgaagggatcggtaagaagacagctgaaaaaatcgtt
tctcagttgggcgaaaatgccgtcgataagcttttaaatgatccaacagttgctgatgag
ttaggtttgagtgccaagcaaaaggagaacctattagccgggatcacggcagataatggg
gctgaacacactctgatcggcttgagtacattaggcttttccgagaaaatggcgggtaag
ctctttgaaaaatatcgtgaaaagactttagatgtcgtccatgaaaatccgtatcagcta
gtttatgatattgaaggcttcggttttaatcgtgctgatcagctagccttgaaactgggt
gtggctgcaacagctgaagttcgcttagcggcggcgatctttgaaagcatggcccaattg
agcctatatttgggaaatacttatacggacggtcccacgttattaaaagaggccttacgc
ttattagagcagagccgacctgagaagatcgaacctgaattattagctgaccagttattg
aaaatgggtgaaaaaggtcaagtgatctcagatgatggtcggatctatttacggcgctac
tatgaagctgaatatacgatcgccgaagagctcaagcgtttggcgactaaaacaagtgag
caagaggtaagtgatactcagatcgatgactttatccaagcgatccaaaaagatctccag
ataacgtatggtcctgatcaaaaagcggcgatcaaagcggctgttaaagccccagtcttt
ttactgaccgggggacctggtacaggtaagactacgatcattatggggatcgtgcggacg
tttgcagcgctacatgagcttgatctatcagatacgagtcaaacgccgatcctcttagct
gctcctaccggaagagctgctaagaagatgagtgaagctactgggttacctgcttcaacg
atccaccgcctattgggcttgaatggtcgtgaagatgaattgcctgaagagacaaaagca
ctagagggtcaattattgatcgttgatgaaacttcgatggtcgatactgtcttgttacag
ttactattagaaagtattcccgaacagatgcaagtcatctttgtgggggaccgtaatcag
ttgccttcagtgggaccaggccaggtcttttctgatctgttagccagtgaaacgttaccg
caaaaagagctcgccaagatctatcggcaaggtgatgggtcaacgatcatcaaattggca
catgcggtcaaggatgggatcgtcccacccgatctaatgcaaaagaccaatgaccgttca
tttatcccttgtcatgctgatcaagtgagttcagtggtcgaacaagtcgttgcagcggct
ttagctaagcaaaataagggcgatgatgttcagatcttagcccccatgtatcgaggggct
gctgggatcacgaacttaaatcagacattacaggcgctcttgaatcctcgaaagccacaa
caaaaagagatcaagtttggaaataacgtatttcggatcggtgaccgtgttttacattta
gtcaacgacccagaaaataatatttttaatggcgatattggtaagatagtcgggatcgag
ttgaaaaaagatcgccccaaagaagataaggtgatcatctcatttgatggtcaagaagtc
gagtttggtcgcaaagatctcatcaacttgacactagcttattgtatgtcgatccataaa
tcacaaggtagtgaatttccgatcgtgatcttacccatggtccagcagtattcacggatg
tttgcccggaacttgctctatacagctttaacacgggccaaggaaaagctcatcttattg
ggtgaaccagaagcttatgccaaatgtatccagaccgtagctttaaaccgtaaaactacg
cttacaacgcgtttatgggaagttttgggtaaaccgaagagttcggacactaaagaagct
attaaagcaggaagtgcgcccaaatttattttaacgccagctttggtcaaaacgggtgag
atcgacccgatgatcgggatggataatttgacaccggcagattttatgcggtaa
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