Ligilactobacillus animalis: FAX13_05445
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Entry
FAX13_05445 CDS
T06852
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani03030
DNA replication
lani03430
Mismatch repair
lani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAX13_05445 (dnaE)
03430 Mismatch repair
FAX13_05445 (dnaE)
03440 Homologous recombination
FAX13_05445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lani03032
]
FAX13_05445 (dnaE)
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_05445 (dnaE)
Enzymes [BR:
lani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAX13_05445 (dnaE)
DNA replication proteins [BR:
lani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAX13_05445 (dnaE)
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAX13_05445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
TAF
TOR1L1_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QCQ04072
LinkDB
All DBs
Position
complement(1142577..1145882)
Genome browser
AA seq
1101 aa
AA seq
DB search
MFAPLQVISANSLLKSTLRIEDYVKRAADLGYQSLVLSDIDVMYGVLDFYHACQKYQIKP
IFGLTLEFENDAKLLLIAQDNTGYHNLLKLSSLKMTTFKQELPDLEEFLNAVMTYSQDLF
IISPAKESLLLKYYEQAGEILKRLKQTAAAGVYLGIDPLLSKQELLAIKLLAQQTQTALI
AASAVHYLEPADYFEVKVLRAIGEAEKLSGVWNKKNTLGKNYLKEISQYHEEYRALGLTK
ALEANARLCDLAQVTLDFPKTKLPHFKTPNEMSAKAYLQKLCQEGLRQRLVADQITETKP
YFDRLKQELAVIDAMGFDDYFLIVWDVTNYAHNNQIRIGPGRGSAAGSLVSYVLKITDVD
PLRYGLLFERFLNPERAQMPDIDLDIPDTKRDQIIKYVHQKYGHEHMAQIITFGTLGARQ
AIRDVARVMGLTSFEIDEWSKALPHKFKLTLKEAYQESQKVKNLIADSQRNELLFKTALK
LEGLPRHYSTHAAGVILSDEVLSDLIPVQLGTDQILLSQFAKGQVEEAGLLKIDFLGLRN
LTILDNALKFVRKGYQEKLDLKQISLDDPLTLRLFQAGQTNGVFQFESTGIKNVLRRLHP
TSFEDVAAVNALYRPGPIGNIDEFIARKHGQHPVSYPEKSLQPILAKTYGIMVYQEQVMQ
VASAMGGFSLGEADLLRRAISKKDQLKIDKLQERFVMGAKAKGYTVASALEVYEYMKRFG
NYGFNRSHAVAYSKMAFELAYLKSHYPAAFFAALLNSVIGNDNKLKEYLGEMRQFKLQVA
GPDINTSQLYFSLKDKKVVFGLGSIKTLRGDLVKAILQERRQNGNFKSLADLIRRLDKKL
LKEEQLKALIYAGAFDQIEPDRSKLLSQLPMVLSNIALSGENQTLFEMLAPKEEKTAETL
SEAELLEKEFYYLGTYLSGHPVEKYAWLRQRQHAKLLAELIPNENVKTVVYVKNKRVIRT
KKGEQMAFLQVADESGETELVIFPREYRRFAALCEPQSILLVSGKVELRNERKSILVSEM
AAAADIKEQYYYLRLERSLAKGTRQQLWRILRAHHGDVPVIIIEENENRKIILQENLWLR
PDESTKEALTTLLGSKNVVLK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgctccattacaagttatcagtgctaacagtttgttaaagagcactttgcgtatc
gaagattatgtcaaacgtgctgccgatttaggataccaaagcttggttttaagcgatatc
gatgtgatgtatggtgtccttgatttttatcatgcctgtcagaaataccagatcaagccg
atctttgggctgaccttagaatttgaaaatgatgcaaaattgctattgatcgcccaggat
aatacgggctaccacaatttactcaaattgtcttcgctaaaaatgaccacgttcaagcaa
gaactcccagacctagaagaatttttaaacgcggtcatgacctatagtcaagatctcttt
atcatctcaccggctaaggaaagtttattattaaaatactacgaacaagctggtgagatc
ttgaagcgcttgaaacagacagcagcggctggggtctatttagggatcgatccgctcttg
tctaaacaagaattattagcgataaaattattagcacagcaaacgcagactgcgttgatc
gctgccagtgcagttcattatctagaaccagctgattattttgaagtcaaagttttgcgg
gcgatcggtgaagcagagaagttaagtggcgtctggaataagaagaacactttaggcaaa
aactatctcaaagagatcagtcaatatcatgaagaatatcgggctttaggactgacaaaa
gccttagaggcaaatgctaggctgtgtgatctagcgcaagtgacactggattttcctaag
actaaattgcctcactttaagacgcctaatgaaatgagtgctaaagcgtatttgcaaaaa
ctttgtcaagaaggattgcgtcaacggttagtagctgatcagataaccgagactaagccg
tattttgaccgcttgaaacaagaattagccgtgatcgatgcgatgggctttgatgattat
tttttgatcgtttgggatgtcactaattatgcgcataataaccagatccggatcgggcca
gggcggggttcggcggcggggtcgttagtttcatatgttttaaagatcactgatgtcgac
cctttgcggtatggtttgttatttgaacgtttcttgaaccccgaacgcgcccaaatgcca
gatatcgatctggatattcctgatactaaacgtgatcagatcatcaaatacgtacatcaa
aaatacggccatgaacatatggctcagatcataacttttggaactttgggggcacggcaa
gcgatccgcgatgttgctcgagtcatgggtttgacgagttttgagatcgatgagtggtca
aaagcattgccccataagttcaaactgaccttaaaagaggcatatcaagaatcacaaaag
gtcaaaaatttgatcgctgatagtcaaagaaatgaattgttgttcaaaacagcgcttaaa
ttagaggggctaccgcgtcattattcaacgcatgctgcaggggtgatcttgagtgatgaa
gtcttgagcgacttgatccccgttcaattagggaccgatcagatcttgttatcccagttt
gctaagggacaagttgaagaagctggcctattgaagatcgactttttaggtttacgaaat
ttgacgatcttagataatgcactcaaatttgtccgcaagggttaccaagaaaaattagat
ctaaaacagatctctttagatgatcctttgactttacggctctttcaagcaggacagaca
aatggcgtctttcaatttgaatcgacggggatcaagaatgttttacggcgtctacatccg
acttcatttgaagacgttgcggcggtcaatgccttatatcgtccggggccgatcggaaat
atcgatgaatttattgcgcgtaaacatgggcaacatcctgttagttatccagaaaaaagt
ttacagccgatcctagctaaaacttatgggatcatggtctaccaagaacaggtcatgcaa
gttgcgtcagcgatggggggctttagcttaggtgaagccgatctcttgcgccgggcgatc
agtaaaaaagatcaactgaagatcgataaattgcaagagcgctttgtcatgggagctaaa
gccaagggatatacggtcgctagtgcgctagaggtctatgagtacatgaaacgttttggt
aattacggttttaaccggtcccacgcggtcgcatattctaaaatggcgtttgagttagcc
tatcttaagagccattatccggctgctttttttgcggctctattgaattcagtgatcgga
aatgataataagttaaaagaatatctaggtgagatgcgccaattcaagttgcaagttgct
ggtccagatatcaacaccagtcagctctatttttcgctcaaagacaaaaaagtcgtcttt
ggtctaggctcgatcaaaactttacgcggcgatctggtcaaggcgatcttacaagagcgg
cgacaaaatggtaatttcaagagtttagccgatcttatccggcgtttggataaaaagctc
ttaaaagaagaacaacttaaagccttgatctatgctggcgcctttgatcaaatagaacca
gatcgaagcaaactattatcacaattaccgatggtgttgagcaatatcgctttgagcggt
gaaaatcagactttatttgaaatgttagcgcctaaagaagaaaagacggctgaaacgctc
tcagaggctgagcttttagaaaaggaattttattacttaggaacatatttgtcaggtcat
ccagtcgagaagtatgcgtggctacgtcaaaggcaacacgcaaaactattggcggaactc
atcccaaatgaaaacgtcaagacggtcgtttatgttaaaaataagcgggtgatccgaact
aaaaaaggtgagcagatggcctttttacaagttgctgatgaaagtggtgaaactgaattg
gtgatctttccgcgggaataccggcgttttgctgctctatgtgaaccccaaagcatcctg
ctagtaagtggaaaagttgagttgcgcaatgaaagaaagagtatcttagtttcagagatg
gctgctgcagccgatatcaaagagcaatattactatttacgtttagaaagatcactagcc
aaggggacacgccagcaactctggcggatcttgcgggctcatcacggggatgttcctgta
atcataatcgaagaaaatgagaataggaaaataattttgcaagaaaatttatggttgcgc
ccagatgaaagcacgaaagaagcgctaacaaccttattaggtagcaaaaatgtcgttttg
aagtaa
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integrated database retrieval system
