Ligilactobacillus animalis: FAX13_06865
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Entry
FAX13_06865 CDS
T06852
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lani
Ligilactobacillus animalis
Pathway
lani03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAX13_06865 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_06865 (uvrB)
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAX13_06865 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAX13_06865 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_5
AAA_22
AAA_19
AAA_7
Mitoc_L55
UB2H
DUF1106
AAA
Motif
Other DBs
NCBI-ProteinID:
QCQ04341
LinkDB
All DBs
Position
complement(1443493..1445493)
Genome browser
AA seq
666 aa
AA seq
DB search
MIERQADKEFKLVSKYQPTGDQPQAIAELATGIKAGKKEQILLGATGTGKTFTISNVIAK
ANKPTLVLAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPKEYRDQALSLRVGQEIERDKLLNQ
LIDVQFERNDIDFQRGRFRVRGDVVEIFPASRDEQALRVEFFGDEIDRIREVDPLTGEIL
GDRNHVVIFPATHFLTSGERLEGSIKSIEAELAQRLEVLRADGKLLEAQRLEQRTTYDIE
MLREMGYCSGIENYSRHMDGRKPGEAPYTLLDFFPDDFLIVVDESHVTMPQVRGMYNGDR
SRKQMLVDYGFRLPSALDNRPLKLAEFEERVNQIIYMSATPGVYEQERTDTVVQQIIRPT
GLLDPEVEVRPIMGQMDDLVAEIAKRTERDERVFVTTLTKKMAEDLTDYFKEMSIKVKYL
HSDIKTLERTQIVRDLRLGKFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNENGHVIMYADTVTDSMQAAMDETARRRAIQMQYNEEHGIVPKTVKKEIRDV
ITMTTKPKESTKALNDKLDFDELSKQEQREMIARLEEQMRTAAKNLDFEDAAALRDTVME
LKAQLD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgaacgtcaagccgataaagagttcaaattagtttcaaaatatcaaccaactgga
gatcaaccacaagcgatcgctgagcttgcgaccgggatcaaagctggtaaaaaagaacag
atcttattaggggctactgggaccgggaaaacttttacgatctcaaatgtgatcgctaaa
gccaacaagccaactttggtcttagcccataataagaccttggcgggacagctctacggg
gagttcaaagaatttttcccagacaatgctgttgaatattttgtatcctactacgattac
tatcaacctgaagcttatgttccttcaagtgatacttatatcgaaaaggattcgagcatc
aatgatgagatcgataaattacgccactctgcgactagttcgttattagagcgcaatgat
gtgatcgtggtggcctcagtttcatcgatctttggtttaggtgatccaaaagaatatcgt
gatcaagctctttcattgcgagtaggtcaagagatcgaacgggataagttgttgaaccaa
ctgatcgatgttcaatttgaacgtaacgatatcgactttcaacgggggcgttttcgtgtt
cgcggtgatgttgtcgagatcttccctgcttcacgtgatgaacaagcgcttagagttgaa
ttttttggggatgagatcgaccggatccgagaagttgatcctttgactggagagatcttg
ggtgatcgtaatcacgttgtcatcttcccagcaacgcactttttgacaagtggtgaacgc
ttagaaggatcgatcaagagcatcgaagccgaattagctcagaggttagaagttttgcgc
gctgatggtaaattgctagaagcccaacgtttagagcaacgaacgacatacgacattgag
atgttgcgcgaaatgggatattgttcggggatcgaaaattattcgcggcatatggatgga
agaaaaccgggtgaagcaccatatacgctgttagacttctttcccgatgattttttgatc
gtagtcgatgaatcccatgttacgatgccccaggtacgcggaatgtacaatggtgaccgc
tcacgtaaacagatgttagtcgattacggttttcgtcttccaagtgccttagataaccga
ccattaaagttagctgaatttgaagaacgagtaaatcagatcatttatatgtcggcgacc
ccaggtgtttatgaacaagaacgtactgatacggtcgtgcaacagatcattcgaccgacg
ggattattggatccagaagttgaagttcgtccgatcatgggacaaatggacgatctagta
gctgagatcgccaaaagaactgaacgcgatgagcgcgtctttgtaacgactttgactaag
aaaatggcagaagatctgaccgattactttaaagagatgagtattaaagtcaagtatctg
cattctgacatcaagacacttgaacggacccagatcgtgcgcgatctacgtttaggaaaa
tttgatgtgctcgttgggatcaatttattacgtgaagggatcgatgtgccagaggtctca
ttagttgcgatcttagatgctgataaagaaggctttttgcgcaatgaacggtctttgatc
caaacgatcggtcgggctgcgcgaaacgaaaatgggcatgtgatcatgtatgctgataca
gtaacagattcgatgcaagcagcgatggatgaaacagcacgacgccgggcgatccaaatg
caatacaatgaagaacatgggatcgtgccaaaaacagtcaaaaaagagatccgcgatgtg
atcacaatgacgactaaaccaaaagaaagcactaaagctttaaatgataaactcgatttt
gatgaattgagcaaacaagaacaacgcgaaatgatcgcacgtttagaggagcaaatgcgt
actgcggctaagaaccttgactttgaagatgcggctgctttacgtgatactgtgatggaa
ttaaaagcacagcttgattaa
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