Ligilactobacillus animalis: FAX13_07025
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Entry
FAX13_07025 CDS
T06852
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani03030
DNA replication
lani03430
Mismatch repair
lani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAX13_07025 (holB)
03430 Mismatch repair
FAX13_07025 (holB)
03440 Homologous recombination
FAX13_07025 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lani03032
]
FAX13_07025 (holB)
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_07025 (holB)
Enzymes [BR:
lani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAX13_07025 (holB)
DNA replication proteins [BR:
lani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAX13_07025 (holB)
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAX13_07025 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
YwqJ-deaminase
Motif
Other DBs
NCBI-ProteinID:
QCQ04373
LinkDB
All DBs
Position
complement(1478051..1479043)
Genome browser
AA seq
330 aa
AA seq
DB search
MEQSIIELQPRLTKHFAKLVDNKKLAHAYLFSGPRGTGKNKLAHWVAQAVFCKQKQNGHP
CLKCNECRRIAQNNQPDVVEIKPEGNSIKVDQIRYLKAEFVKSGVESNRKLFIIQNAEKM
TVSAANSLLKFLEEPSGDVTAFLLTDSVNQILPTIISRCQLVELSSLTLKKLVATLETKG
IGADKANLLAHLTNSQKEAQELDGDEDFNKLLANVWEWFNQVLRNDWRAFVGVQTKLMPY
ATDKASQDRLLQLIVLLTRDILLLKYGKNEDVAFIMYSKELNERNLKIPENGAIRAVEAV
LSTKRQRAVNVSFQSILEALTLNLCSWYQA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtcgatcatcgagctccaaccacgtttgacaaagcattttgccaaattggtg
gacaataaaaaattggcccatgcttatttattttctggtccacgtgggactggcaaaaat
aagctagctcattgggtcgcccaagccgttttttgtaagcaaaagcaaaacggtcatcca
tgcttaaagtgcaatgagtgtcggcggatcgcccaaaataatcagcctgatgtagttgag
atcaagccagaaggaaattcgatcaaagtcgaccagatcagatatttgaaggctgaattc
gttaaaagtggggtcgagagcaatcggaagctttttatcattcaaaatgctgaaaagatg
acggtcagtgctgctaacagtctgttgaaatttttagaagaaccaagtggcgatgtgacg
gcctttttattgacagatagtgtaaatcagatcttgccaacgatcatctcacggtgtcag
ttagtcgaattgtcttcgttgacattgaagaaattagttgcaacgttagaaactaagggg
atcggagcggataaggctaatttattagcccacttgactaatagtcaaaaagaagctcaa
gaacttgatggtgacgaagattttaataaattactcgccaatgtttgggaatggtttaat
caagttttacgaaatgattggcgggcttttgtaggggtccagaccaaattgatgccgtat
gcgaccgataaagctagccaagatcggttattacagttgatagtcttattaacacgtgat
attttattgttaaaatatggtaaaaatgaggacgttgcctttataatgtatagtaaagag
ctcaatgaaagaaatttaaaaattccggaaaatggagctatccgcgccgttgaagctgtc
ctttcgactaaacggcaacgagcggtcaatgtctcatttcagagtatcttagaggcactg
actttgaatttatgcagttggtatcaagcatga
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