Ligilactobacillus animalis: FAX13_07450
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Entry
FAX13_07450 CDS
T06852
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani03420
Nucleotide excision repair
lani03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAX13_07450 (pcrA)
03430 Mismatch repair
FAX13_07450 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_07450 (pcrA)
Enzymes [BR:
lani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAX13_07450 (pcrA)
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAX13_07450 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FAX13_07450 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
AAA_30
UvrD_C_2
AAA_11
FWWh
Terminase_6N
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCQ05123
LinkDB
All DBs
Position
complement(1552381..1554579)
Genome browser
AA seq
732 aa
AA seq
DB search
MNDKQAEAVACTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKNVNPWNILAITFTNKAARE
MRERINKLIAEGAEDIWVSTFHALCVRILRRDAEKIGYDRNFTIASTSEQRTLMKHILAD
NLNVDVKKFEPRAVLSAISNAKNDLKTPAELRKDAADPFSQVVSDAYELYQEQLQNNQAL
DFDDLIMQTIRLFKESPETLEFYQRKFHYIHVDEYQDTNEAQYQLVSMLAQTYRNLCVVG
DADQSIYGWRGANMENIMNFEEDYPDATVIKLEQNYRSTKTILQAANEVIENNINRKAKT
LWTQNAEGEKIHYYRADNANDEAFYVVKQIQQKMRTEGKHYGDFAVLYRTNAQSRVIEET
FVKANIPYKLVGAHRFYDRKEILDILAYLRLAANPNDSLSFARVANEPKRGIGATSLAKL
QAFAEMNGLSLIEAAENVIMTGVSGKAATQLESFAKLIRRFNELEKTKNITELTEIILDE
SGYKQSLQAKNTLEDQSRLENLEEFMSVTKQFDENWEPEEENSDPFVDFLADLALVSDQD
SVDEDPDEVTLMTLHAAKGLEFPTVFLMGLEEGIFPLGRAVMDESELEEERRLAYVGITR
AEEELYLSNAFSRMLYGRRQSNQVSRFISEISDELLQSDNETLANYQPKTKVDVPFAKKP
VYRKPAGTVEKSQGTGAEKKQWNIGDKVSHKAWGTGTVVKVSGSGEDIELDIAFAGQGIK
RLLAAFAPITKI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataagcaagcagaagctgtagcctgcactgaagggccactactcatcatggcc
ggtgccggtagtgggaaaacacgagtcttgacacaccgtgtagcctacttgatcgaagaa
aaaaatgtaaatccttggaatattttagcgatcaccttcaccaataaagcagcgcgggaa
atgcgtgagcggatcaataaattgatcgctgaaggtgcagaagatatttgggtctcgact
ttccacgctttatgtgtccggatcttacgccgtgatgctgaaaagatcggctatgatcgc
aattttacgatcgcaagcacaagtgaacaacggactttgatgaaacacattttagcggat
aatttaaacgttgacgttaaaaaattcgagccccgggctgttttgagtgcgatctcgaac
gccaaaaatgatttaaagacaccagcagaactaagaaaagatgcagctgatccattttca
caggtggtaagtgatgcctatgaattatatcaagagcagttgcaaaataatcaagctttg
gattttgatgatctcatcatgcaaacgatccggttatttaaagagtcaccagaaacattg
gaattttatcaacgtaaattccactatatccatgtggatgaatatcaagatactaacgaa
gctcaatatcaattggtcagcatgttagcccaaacatatcgtaatctatgtgttgtgggg
gatgctgatcaaagtatttacggttggcgtggggctaacatggaaaatatcatgaatttt
gaggaagactatcccgatgcgactgtgatcaagttggagcaaaattatcgttcgactaag
acgatcttgcaagcggctaatgaagttatcgaaaataacatcaatcgtaaagctaaaact
ttatggacacaaaatgcagaaggtgaaaagatccattactaccgtgcagataatgccaat
gatgaggctttttatgtcgttaagcagatccagcaaaagatgcgcactgaaggtaagcat
tacggtgattttgctgtcttataccgcacgaatgcccaatcacgtgtgatcgaagaaacc
tttgtcaaagctaatatcccatataaattagttggggctcaccgtttctacgatcggaag
gaaatcttggatattttagcttatctgcgtttagctgccaatccgaatgattccttgagt
tttgctcgcgttgccaatgaacctaaacgagggatcggagcaactagtttggctaaattg
caagcatttgctgagatgaacggtctttccttgatcgaagccgcagaaaacgtcattatg
actggcgtaagtggcaaggcagctacccaattagaaagtttcgctaagttgatccggcgc
ttcaatgaattggagaagactaagaatatcactgagttgacggagatcattttagatgaa
tcgggctataaacaaagcttacaagctaaaaatacgctcgaagatcaaagtcgtctagaa
aacttagaagaatttatgtctgtaacaaagcaatttgatgaaaattgggaaccagaagaa
gaaaatagcgatccgttcgttgatttcttagctgacctagctttagtttctgatcaagat
agcgttgatgaagatccagatgaagtgactttgatgacattgcacgccgctaaggggctg
gaatttccaacggtctttttgatgggcttagaagaagggatcttcccgttaggccgagct
gtgatggatgaaagcgagctcgaagaagaacggcgcttggcatatgttgggatcacccgc
gctgaagaagaactctacttatcaaatgccttctcgcggatgctctatggacggcgccaa
agcaaccaagtttcacgttttatcagtgagatctccgatgaattgttgcaaagtgataac
gaaactttagccaattatcaaccaaaaaccaaagtcgacgttccatttgctaagaagcca
gtttaccgcaaaccagctggaactgtcgaaaaaagccaaggaactggggctgaaaagaaa
caatggaatatcggtgataaggtctcccataaagcctggggtacaggaactgtggtcaag
gtcagtggtagtggtgaagatatcgaacttgatatcgcctttgccggccaagggatcaag
cggctattagcggcctttgcaccgatcactaagatttaa
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